Analysis of interatomic Contacts of Structural Units in PDB entry:
5LLT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LLT entry

There are 2 chains in PDB entry 5LLT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 3GLU 207
B
 HIS 3GLU 207
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 5LLT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 29Right-handed alpha
Helix 2
AA2
A
51 65Right-handed alpha
Helix 3
AA3
A
70 72Right-handed 310
Helix 4
AA4
A
87 99Right-handed alpha
Helix 5
AA5
A
114 119Right-handed 310
Helix 6
AA6
A
121 128Right-handed alpha
Helix 7
AA7
A
142 147Right-handed alpha
Helix 8
AA8
A
161 166Right-handed 310
Helix 9
AA9
A
167 173Right-handed alpha
Helix 10
AB1
A
180 185Right-handed alpha
Helix 11
AB2
A
189 200Right-handed alpha
Helix 12
AB3
A
201 204Right-handed 310
Helix 13
AB4
B
17 29Right-handed alpha
Helix 14
AB5
B
51 66Right-handed alpha
Helix 15
AB6
B
70 72Right-handed 310
Helix 16
AB7
B
87 99Right-handed alpha
Helix 17
AB8
B
111 113Right-handed 310
Helix 18
AB9
B
114 119Right-handed 310
Helix 19
AC1
B
121 128Right-handed alpha
Helix 20
AC2
B
142 147Right-handed alpha
Helix 21
AC3
B
161 166Right-handed 310
Helix 22
AC4
B
167 173Right-handed alpha
Helix 23
AC5
B
180 188Right-handed alpha
Helix 24
AC6
B
189 200Right-handed alpha
Helix 25
AC7
B
201 204Right-handed 310
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There are 2 sheets in PDB entry 5LLT. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 76first strand
Strand 2
A
35 40parallel
Strand 3
A
4 11parallel
Strand 4
A
102 109parallel
Strand 5
A
130 134parallel
Strand 6
A
151 155parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 76first strand
Strand 2
B
35 40parallel
Strand 3
B
5 11parallel
Strand 4
B
103 109parallel
Strand 5
B
130 134parallel
Strand 6
B
151 155parallel
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