Analysis of interatomic Contacts of Structural Units in PDB entry:
5LPM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LPM entry

There are 2 chains in PDB entry 5LPM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1046GLY 1161
B
 SER 1046GLY 1161
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5LPM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1050 1067Right-handed alpha
Helix 2
AA2
A
1072 1076Right-handed 310
Helix 3
AA3
A
1088 1093Right-handed alpha
Helix 4
AA4
A
1098 1109Right-handed alpha
Helix 5
AA5
A
1113 1132Right-handed alpha
Helix 6
AA6
A
1136 1161Right-handed alpha
Helix 7
AA7
B
1050 1067Right-handed alpha
Helix 8
AA8
B
1072 1076Right-handed 310
Helix 9
AA9
B
1088 1093Right-handed alpha
Helix 10
AB1
B
1098 1108Right-handed alpha
Helix 11
AB2
B
1113 1132Right-handed alpha
Helix 12
AB3
B
1136 1161Right-handed alpha
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There are no sheets in PDB entry 5LPM
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