Analysis of interatomic Contacts of Structural Units in PDB entry:
5LPU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LPU entry

There are 4 chains in PDB entry 5LPU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ASP 339
B
 SER 2ASP 339
C
 ALA 2PHE 90
D
 SER -1PHE 93
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 5LPU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 13Right-handed alpha
Helix 2
AA2
A
34 48Right-handed alpha
Helix 3
AA3
A
52 61Right-handed alpha
Helix 4
AA4
A
64 80Right-handed alpha
Helix 5
AA5
A
82 91Right-handed alpha
Helix 6
AA6
A
92 104Right-handed alpha
Helix 7
AA7
A
105 119Right-handed alpha
Helix 8
AA8
A
124 135Right-handed alpha
Helix 9
AA9
A
136 152Right-handed alpha
Helix 10
AB1
A
154 163Right-handed alpha
Helix 11
AB2
A
164 176Right-handed alpha
Helix 12
AB3
A
187 202Right-handed alpha
Helix 13
AB4
A
209 220Right-handed alpha
Helix 14
AB5
A
221 236Right-handed alpha
Helix 15
AB6
A
239 248Right-handed alpha
Helix 16
AB7
A
249 280Right-handed alpha
Helix 17
AB8
A
284 295Right-handed alpha
Helix 18
AB9
A
299 312Right-handed alpha
Helix 19
AC1
A
314 323Right-handed alpha
Helix 20
AC2
A
324 336Right-handed alpha
Helix 21
AC3
B
2 15Right-handed alpha
Helix 22
AC4
B
23 31Right-handed alpha
Helix 23
AC5
B
32 48Right-handed alpha
Helix 24
AC6
B
52 61Right-handed alpha
Helix 25
AC7
B
64 80Right-handed alpha
Helix 26
AC8
B
82 91Right-handed alpha
Helix 27
AC9
B
92 104Right-handed alpha
Helix 28
AD1
B
105 119Right-handed alpha
Helix 29
AD2
B
124 135Right-handed alpha
Helix 30
AD3
B
136 151Right-handed alpha
Helix 31
AD4
B
154 160Right-handed alpha
Helix 32
AD5
B
164 176Right-handed alpha
Helix 33
AD6
B
187 202Right-handed alpha
Helix 34
AD7
B
209 220Right-handed alpha
Helix 35
AD8
B
221 236Right-handed alpha
Helix 36
AD9
B
239 248Right-handed alpha
Helix 37
AE1
B
249 280Right-handed alpha
Helix 38
AE2
B
284 296Right-handed alpha
Helix 39
AE3
B
299 312Right-handed alpha
Helix 40
AE4
B
314 323Right-handed alpha
Helix 41
AE5
B
324 336Right-handed alpha
Helix 42
AE6
C
3 21Right-handed alpha
Helix 43
AE7
C
30 42Right-handed alpha
Helix 44
AE8
C
42 47Right-handed alpha
Helix 45
AE9
C
51 63Right-handed alpha
Helix 46
AF1
C
71 89Right-handed alpha
Helix 47
AF2
D
3 21Right-handed alpha
Helix 48
AF3
D
30 42Right-handed alpha
Helix 49
AF4
D
43 46Right-handed 310
Helix 50
AF5
D
51 63Right-handed alpha
Helix 51
AF6
D
71 92Right-handed alpha
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There are no sheets in PDB entry 5LPU
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