Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 5LQW entry
There are 31 chains in PDB entry 5LQW
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
LYS 131 | LEU 2398 |
B
|
LYS 111 | TYR 998 |
C
|
SER 115 | LYS 2163 |
D
|
PRO 8 | ASP 284 |
E
|
GLU 17 | ALA 154 |
F
|
SER 8 | MET 249 |
H
|
ILE 11 | ALA 490 |
J
|
GLU 26 | ASN 135 |
K
|
ALA 107 | LEU 446 |
L
|
VAL 235 | TYR 266 |
M
|
THR 31 | LEU 235 |
N
|
ILE 28 | VAL 204 |
O
|
GLU 186 | LYS 864 |
P
|
ASP 393 | ASN 654 |
Q
|
ASN 126 | ASN 960 |
R
|
ASP 39 | GLU 272 |
W
|
VAL 12 | LYS 259 |
X
|
ASP 56 | LEU 1331 |
Y
|
PHE 6 | ASN 95 |
Z
|
GLN 5 | MET 73 |
b
|
ILE 4 | LEU 102 |
d
|
ASN 4 | LYS 85 |
e
|
MET 10 | SER 92 |
f
|
PRO 12 | GLU 83 |
g
|
VAL 2 | ALA 76 |
h
|
MET 1 | ASP 109 |
j
|
ARG 15 | PRO 108 |
2
|
G 3 | U 83 |
5
|
C 4 | U 173 |
6
|
G 1 | U 102 |
9
|
C 2 | C 518 |
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There are no helices in PDB entry
5LQW
There are no sheets in PDB entry
5LQW
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
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