Analysis of interatomic Contacts of Structural Units in PDB entry:
5LSA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LSA entry

There is 1 chain in PDB entry 5LSA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 53GLY 266
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5LSA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 67Right-handed alpha
Helix 2
AA2
A
71 86Right-handed alpha
Helix 3
AA3
A
93 108Right-handed alpha
Helix 4
AA4
A
120 128Right-handed alpha
Helix 5
AA5
A
142 157Right-handed alpha
Helix 6
AA6
A
158 160Right-handed 310
Helix 7
AA7
A
168 173Right-handed alpha
Helix 8
AA8
A
175 181Right-handed alpha
Helix 9
AA9
A
193 195Right-handed 310
Helix 10
AB1
A
196 207Right-handed alpha
Helix 11
AB2
A
226 236Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5LSA.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 166first strand
Strand 2
A
135 140parallel
Strand 3
A
111 115parallel
Strand 4
A
185 190parallel
Strand 5
A
210 218parallel
Strand 6
A
254 262anti-parallel
Strand 7
A
239 247anti-parallel
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