Analysis of interatomic Contacts of Structural Units in PDB entry:
5LSK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LSK entry

There are 5 chains in PDB entry 5LSK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LYS 200
B
 THR 31GLU 203
D
 GLY 116SER 317
N
 PRO 32VAL 204
P
 LEU 6ALA 48
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 5LSK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 14Right-handed alpha
Helix 2
AA2
A
16 46Right-handed alpha
Helix 3
AA3
A
57 90Right-handed alpha
Helix 4
AA4
A
99 107Right-handed 310
Helix 5
AA5
A
110 168Right-handed alpha
Helix 6
AA6
A
177 197Right-handed alpha
Helix 7
AA7
B
33 53Right-handed alpha
Helix 8
AA8
B
54 61Right-handed alpha
Helix 9
AA9
B
62 67Right-handed alpha
Helix 10
AB1
B
71 97Right-handed alpha
Helix 11
AB2
B
100 116Right-handed alpha
Helix 12
AB3
B
128 189Right-handed alpha
Helix 13
AB4
B
189 201Right-handed alpha
Helix 14
AB5
D
116 121Right-handed 310
Helix 15
AB6
D
130 150Right-handed alpha
Helix 16
AB7
D
161 186Right-handed alpha
Helix 17
AB8
D
188 193Right-handed 310
Helix 18
AB9
D
204 241Right-handed alpha
Helix 19
AC1
D
264 270Right-handed alpha
Helix 20
AC2
D
273 313Right-handed alpha
Helix 21
AC3
D
314 317Right-handed 310
Helix 22
AC4
N
42 60Right-handed alpha
Helix 23
AC5
N
61 63Right-handed 310
Helix 24
AC6
N
68 87Right-handed alpha
Helix 25
AC7
N
104 150Right-handed alpha
Helix 26
AC8
N
169 201Right-handed alpha
Helix 27
AC9
P
34 42Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5LSK.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
38 39first strand
Strand 2
N
88 89parallel
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