Analysis of interatomic Contacts of Structural Units in PDB entry:
5LTA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LTA entry

There are 2 chains in PDB entry 5LTA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 61ALA 758
E
 U 1 U 8
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 5LTA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
62 71Right-handed alpha
Helix 2
AA2
A
83 94Right-handed alpha
Helix 3
AA3
A
96 101Right-handed alpha
Helix 4
AA4
A
101 112Right-handed alpha
Helix 5
AA5
A
124 137Right-handed alpha
Helix 6
AA6
A
152 167Right-handed alpha
Helix 7
AA7
A
196 204Right-handed alpha
Helix 8
AA8
A
220 223Right-handed 310
Helix 9
AA9
A
224 238Right-handed alpha
Helix 10
AB1
A
254 262Right-handed alpha
Helix 11
AB2
A
288 304Right-handed alpha
Helix 12
AB3
A
315 337Right-handed alpha
Helix 13
AB4
A
352 357Right-handed alpha
Helix 14
AB5
A
358 361Right-handed 310
Helix 15
AB6
A
422 431Right-handed alpha
Helix 16
AB7
A
446 454Right-handed alpha
Helix 17
AB8
A
460 464Right-handed 310
Helix 18
AB9
A
467 477Right-handed alpha
Helix 19
AC1
A
492 506Right-handed alpha
Helix 20
AC2
A
516 523Right-handed alpha
Helix 21
AC3
A
528 537Right-handed alpha
Helix 22
AC4
A
538 542Right-handed 310
Helix 23
AC5
A
543 555Right-handed alpha
Helix 24
AC6
A
566 575Right-handed alpha
Helix 25
AC7
A
582 601Right-handed alpha
Helix 26
AC8
A
603 611Right-handed alpha
Helix 27
AC9
A
614 635Right-handed alpha
Helix 28
AD1
A
648 662Right-handed alpha
Helix 29
AD2
A
720 728Right-handed alpha
Helix 30
AD3
A
740 756Right-handed alpha
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There are 4 sheets in PDB entry 5LTA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 184first strand
Strand 2
A
175 179anti-parallel
Strand 3
A
191 195parallel
Strand 4
A
145 150parallel
Strand 5
A
212 218parallel
Strand 6
A
245 250parallel
Strand 7
A
114 119parallel
Strand 8
A
267 270parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 281first strand
Strand 2
A
439 443parallel
Strand 3
A
393 398parallel
Strand 4
A
308 312parallel
Strand 5
A
375 380parallel
Strand 6
A
342 347parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 408first strand
Strand 2
A
413 420anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
665 668first strand
Strand 2
A
675 678anti-parallel
Strand 3
A
684 687anti-parallel
Strand 4
A
711 718parallel
Strand 5
A
699 707anti-parallel
Strand 6
A
665 668anti-parallel
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