Analysis of interatomic Contacts of Structural Units in PDB entry:
5LUZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LUZ entry

There are 2 chains in PDB entry 5LUZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 15HIS 679
B
 GLY 13MET 595
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 5LUZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 55Right-handed alpha
Helix 2
AA2
A
65 85Right-handed alpha
Helix 3
AA3
A
85 90Right-handed alpha
Helix 4
AA4
A
92 115Right-handed alpha
Helix 5
AA5
A
116 130Right-handed alpha
Helix 6
AA6
A
131 135Right-handed 310
Helix 7
AA7
A
136 153Right-handed alpha
Helix 8
AA8
A
158 186Right-handed alpha
Helix 9
AA9
A
201 202Right-handed 310
Helix 10
AB1
A
204 206Right-handed 310
Helix 11
AB2
A
221 232Right-handed alpha
Helix 12
AB3
A
234 246Right-handed alpha
Helix 13
AB4
A
249 271Right-handed alpha
Helix 14
AB5
A
275 282Right-handed alpha
Helix 15
AB6
A
288 326Right-handed alpha
Helix 16
AB7
A
337 351Right-handed alpha
Helix 17
AB8
A
353 358Right-handed alpha
Helix 18
AB9
A
359 361Right-handed 310
Helix 19
AC1
A
362 379Right-handed alpha
Helix 20
AC2
A
465 485Right-handed alpha
Helix 21
AC3
A
489 493Right-handed 310
Helix 22
AC4
A
503 510Right-handed alpha
Helix 23
AC5
A
511 514Right-handed 310
Helix 24
AC6
A
515 523Right-handed alpha
Helix 25
AC7
A
533 543Right-handed alpha
Helix 26
AC8
A
544 546Right-handed 310
Helix 27
AC9
A
547 566Right-handed alpha
Helix 28
AD1
A
572 584Right-handed alpha
Helix 29
AD2
A
595 603Right-handed 310
Helix 30
AD3
A
611 627Right-handed alpha
Helix 31
AD4
A
635 647Right-handed alpha
Helix 32
AD5
A
649 653Right-handed 310
Helix 33
AD6
A
654 664Right-handed alpha
Helix 34
AD7
A
669 677Right-handed alpha
Helix 35
AD8
B
13 18Right-handed 310
Helix 36
AD9
B
30 55Right-handed alpha
Helix 37
AE1
B
65 85Right-handed alpha
Helix 38
AE2
B
85 90Right-handed alpha
Helix 39
AE3
B
92 115Right-handed alpha
Helix 40
AE4
B
116 130Right-handed alpha
Helix 41
AE5
B
136 153Right-handed alpha
Helix 42
AE6
B
158 186Right-handed alpha
Helix 43
AE7
B
201 208Right-handed alpha
Helix 44
AE8
B
221 232Right-handed alpha
Helix 45
AE9
B
234 246Right-handed alpha
Helix 46
AF1
B
249 271Right-handed alpha
Helix 47
AF2
B
275 282Right-handed alpha
Helix 48
AF3
B
288 326Right-handed alpha
Helix 49
AF4
B
337 351Right-handed alpha
Helix 50
AF5
B
353 358Right-handed alpha
Helix 51
AF6
B
359 361Right-handed 310
Helix 52
AF7
B
362 379Right-handed alpha
Helix 53
AF8
B
465 485Right-handed alpha
Helix 54
AF9
B
489 493Right-handed 310
Helix 55
AG1
B
503 510Right-handed alpha
Helix 56
AG2
B
511 514Right-handed 310
Helix 57
AG3
B
515 523Right-handed alpha
Helix 58
AG4
B
533 543Right-handed alpha
Helix 59
AG5
B
544 546Right-handed 310
Helix 60
AG6
B
547 566Right-handed alpha
Helix 61
AG7
B
572 584Right-handed alpha
Helix 62
AG8
B
594 603Right-handed 310
Helix 63
AG9
B
611 627Right-handed alpha
Helix 64
AH1
B
635 646Right-handed alpha
Helix 65
AH2
B
649 653Right-handed 310
Helix 66
AH3
B
654 664Right-handed alpha
Helix 67
AH4
B
669 677Right-handed alpha
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There are 4 sheets in PDB entry 5LUZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 192first strand
Strand 2
A
216 219anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
381 385first strand
Strand 2
A
396 401anti-parallel
Strand 3
A
408 415anti-parallel
Strand 4
A
445 450parallel
Strand 5
A
427 432anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
189 192first strand
Strand 2
B
216 219anti-parallel
Strand 3
B
209 210anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
381 385first strand
Strand 2
B
396 401anti-parallel
Strand 3
B
408 415anti-parallel
Strand 4
B
445 450parallel
Strand 5
B
427 432anti-parallel
Strand 6
D
7 8anti-parallel
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