Analysis of interatomic Contacts of Structural Units in PDB entry:
5LVR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LVR entry

There are 2 chains in PDB entry 5LVR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 724ASP 831
B
 ARG 723ILE 830
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5LVR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
726 742Right-handed alpha
Helix 2
AA2
A
745 749Right-handed 310
Helix 3
AA3
A
753 757Right-handed 310
Helix 4
AA4
A
759 764Right-handed alpha
Helix 5
AA5
A
769 779Right-handed alpha
Helix 6
AA6
A
784 803Right-handed alpha
Helix 7
AA7
A
807 827Right-handed alpha
Helix 8
AA8
B
724 742Right-handed alpha
Helix 9
AA9
B
743 749Right-handed 310
Helix 10
AB1
B
753 757Right-handed 310
Helix 11
AB2
B
759 764Right-handed alpha
Helix 12
AB3
B
769 779Right-handed alpha
Helix 13
AB4
B
784 803Right-handed alpha
Helix 14
AB5
B
807 827Right-handed alpha
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There are no sheets in PDB entry 5LVR
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il