Analysis of interatomic Contacts of Structural Units in PDB entry:
5LW3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LW3 entry

There is 1 chain in PDB entry 5LW3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2GLN 382
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 5LW3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 8Right-handed 310
Helix 2
2
A
19 31Right-handed alpha
Helix 3
3
A
52 54Right-handed 310
Helix 4
4
A
111 113Right-handed 310
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There are 6 sheets in PDB entry 5LW3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 13 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 39first strand
Strand 2
A
63 67parallel
Strand 3
A
100 103parallel
Strand 4
A
136 139parallel
Strand 5
A
161 163parallel
Strand 6
A
184 186parallel
Strand 7
A
207 210parallel
Strand 8
A
237 240parallel
Strand 9
A
260 263parallel
Strand 10
A
284 286parallel
Strand 11
A
324 326parallel
Strand 12
A
351 353parallel
Strand 13
A
372 374parallel
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There are 12 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 46first strand
Strand 2
A
73 77parallel
Strand 3
A
105 108parallel
Strand 4
A
141 144parallel
Strand 5
A
166 168parallel
Strand 6
A
189 191parallel
Strand 7
A
213 215parallel
Strand 8
A
243 245parallel
Strand 9
A
266 268parallel
Strand 10
A
289 291parallel
Strand 11
A
329 331parallel
Strand 12
A
356 358parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 59first strand
Strand 2
A
89 91parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 123first strand
Strand 2
A
151 153parallel
Strand 3
A
175 178parallel
Strand 4
A
198 201parallel
Strand 5
A
222 225parallel
Strand 6
A
252 255parallel
Strand 7
A
275 278parallel
Strand 8
A
302 305parallel
Strand 9
A
340 342parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 134first strand
Strand 2
A
156 158parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 309first strand
Strand 2
A
316 318anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il