Analysis of interatomic Contacts of Structural Units in PDB entry:
5LWE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LWE entry

There are 2 chains in PDB entry 5LWE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 44HIS 345
B
 ASN 32HIS 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5LWE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 76Right-handed alpha
Helix 2
AA2
A
81 107Right-handed alpha
Helix 3
AA3
A
117 149Right-handed alpha
Helix 4
AA4
A
150 155Right-handed alpha
Helix 5
AA5
A
157 180Right-handed alpha
Helix 6
AA6
A
180 186Right-handed alpha
Helix 7
AA7
A
209 223Right-handed alpha
Helix 8
AA8
A
223 244Right-handed alpha
Helix 9
AA9
A
248 253Right-handed alpha
Helix 10
AB1
A
253 283Right-handed alpha
Helix 11
AB2
A
288 308Right-handed alpha
Helix 12
AB3
A
309 311Right-handed 310
Helix 13
AB4
A
312 321Right-handed alpha
Helix 14
AB5
A
323 345Right-handed alpha
Helix 15
AB6
B
33 38Right-handed alpha
Helix 16
AB7
B
41 76Right-handed alpha
Helix 17
AB8
B
81 99Right-handed alpha
Helix 18
AB9
B
99 109Right-handed alpha
Helix 19
AC1
B
118 150Right-handed alpha
Helix 20
AC2
B
150 157Right-handed alpha
Helix 21
AC3
B
157 185Right-handed alpha
Helix 22
AC4
B
209 223Right-handed alpha
Helix 23
AC5
B
223 244Right-handed alpha
Helix 24
AC6
B
248 253Right-handed alpha
Helix 25
AC7
B
253 284Right-handed alpha
Helix 26
AC8
B
288 309Right-handed alpha
Helix 27
AC9
B
312 321Right-handed alpha
Helix 28
AD1
B
323 344Right-handed alpha
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There are no sheets in PDB entry 5LWE
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il