Analysis of interatomic Contacts of Structural Units in PDB entry:
5LWL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LWL entry

There are 2 chains in PDB entry 5LWL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0LYS 121
B
 ALA 0LYS 121
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 5LWL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 23Right-handed alpha
Helix 2
AA2
A
35 46Right-handed alpha
Helix 3
AA3
A
61 72Right-handed alpha
Helix 4
AA4
A
85 92Right-handed alpha
Helix 5
AA5
A
109 120Right-handed alpha
Helix 6
AA6
B
10 25Right-handed alpha
Helix 7
AA7
B
35 46Right-handed alpha
Helix 8
AA8
B
61 72Right-handed alpha
Helix 9
AA9
B
85 92Right-handed alpha
Helix 10
AB1
B
107 120Right-handed alpha
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There are 2 sheets in PDB entry 5LWL. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 33first strand
Strand 2
A
4 7parallel
Strand 3
A
50 53parallel
Strand 4
A
77 82parallel
Strand 5
B
102 103parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 103first strand
Strand 2
B
77 82parallel
Strand 3
B
50 53parallel
Strand 4
B
4 7parallel
Strand 5
B
30 33parallel
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