Analysis of interatomic Contacts of Structural Units in PDB entry:
5LWZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LWZ entry

There are 3 chains in PDB entry 5LWZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 3LEU 384
B
 SER 4LEU 384
C
 PRO 3LEU 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 5LWZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 17Right-handed alpha
Helix 2
AA2
A
25 35Right-handed alpha
Helix 3
AA3
A
41 47Right-handed alpha
Helix 4
AA4
A
54 61Right-handed alpha
Helix 5
AA5
A
79 105Right-handed alpha
Helix 6
AA6
A
114 124Right-handed alpha
Helix 7
AA7
A
136 140Right-handed 310
Helix 8
AA8
A
142 152Right-handed alpha
Helix 9
AA9
A
182 196Right-handed alpha
Helix 10
AB1
A
205 216Right-handed alpha
Helix 11
AB2
A
238 249Right-handed alpha
Helix 12
AB3
A
257 262Right-handed alpha
Helix 13
AB4
A
264 268Right-handed 310
Helix 14
AB5
A
269 285Right-handed alpha
Helix 15
AB6
A
307 309Right-handed 310
Helix 16
AB7
A
310 321Right-handed alpha
Helix 17
AB8
A
324 333Right-handed alpha
Helix 18
AB9
A
333 353Right-handed alpha
Helix 19
AC1
A
367 384Right-handed alpha
Helix 20
AC2
B
5 17Right-handed alpha
Helix 21
AC3
B
25 35Right-handed alpha
Helix 22
AC4
B
41 47Right-handed alpha
Helix 23
AC5
B
54 61Right-handed alpha
Helix 24
AC6
B
79 105Right-handed alpha
Helix 25
AC7
B
114 124Right-handed alpha
Helix 26
AC8
B
136 140Right-handed 310
Helix 27
AC9
B
142 152Right-handed alpha
Helix 28
AD1
B
182 196Right-handed alpha
Helix 29
AD2
B
205 216Right-handed alpha
Helix 30
AD3
B
238 249Right-handed alpha
Helix 31
AD4
B
257 262Right-handed alpha
Helix 32
AD5
B
264 268Right-handed 310
Helix 33
AD6
B
269 285Right-handed alpha
Helix 34
AD7
B
307 309Right-handed 310
Helix 35
AD8
B
310 321Right-handed alpha
Helix 36
AD9
B
324 333Right-handed alpha
Helix 37
AE1
B
333 353Right-handed alpha
Helix 38
AE2
B
367 383Right-handed alpha
Helix 39
AE3
C
4 17Right-handed alpha
Helix 40
AE4
C
25 35Right-handed alpha
Helix 41
AE5
C
41 47Right-handed alpha
Helix 42
AE6
C
54 61Right-handed alpha
Helix 43
AE7
C
79 105Right-handed alpha
Helix 44
AE8
C
114 124Right-handed alpha
Helix 45
AE9
C
136 140Right-handed 310
Helix 46
AF1
C
142 152Right-handed alpha
Helix 47
AF2
C
182 196Right-handed alpha
Helix 48
AF3
C
205 216Right-handed alpha
Helix 49
AF4
C
238 249Right-handed alpha
Helix 50
AF5
C
257 262Right-handed alpha
Helix 51
AF6
C
264 268Right-handed 310
Helix 52
AF7
C
269 285Right-handed alpha
Helix 53
AF8
C
307 309Right-handed 310
Helix 54
AF9
C
310 321Right-handed alpha
Helix 55
AG1
C
324 333Right-handed alpha
Helix 56
AG2
C
333 353Right-handed alpha
Helix 57
AG3
C
367 383Right-handed alpha
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There are 9 sheets in PDB entry 5LWZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 24first strand
Strand 2
A
65 69parallel
Strand 3
A
127 134parallel
Strand 4
A
109 111parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 24first strand
Strand 2
A
65 69parallel
Strand 3
A
127 134parallel
Strand 4
A
154 158parallel
Strand 5
A
198 200parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 222first strand
Strand 2
A
251 254parallel
Strand 3
A
289 291parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 24first strand
Strand 2
B
65 69parallel
Strand 3
B
127 134parallel
Strand 4
B
109 111parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 24first strand
Strand 2
B
65 69parallel
Strand 3
B
127 134parallel
Strand 4
B
154 158parallel
Strand 5
B
198 200parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
221 222first strand
Strand 2
B
251 254parallel
Strand 3
B
289 291parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
20 24first strand
Strand 2
C
65 69parallel
Strand 3
C
127 134parallel
Strand 4
C
109 111parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
20 24first strand
Strand 2
C
65 69parallel
Strand 3
C
127 134parallel
Strand 4
C
154 158parallel
Strand 5
C
198 200parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
221 222first strand
Strand 2
C
251 254parallel
Strand 3
C
289 291parallel
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