Analysis of interatomic Contacts of Structural Units in PDB entry:
5LX6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LX6 entry

There are 2 chains in PDB entry 5LX6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 817VAL 1007
B
 ASN 819VAL 1007
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 5LX6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
827 840Right-handed alpha
Helix 2
AA2
A
841 845Right-handed 310
Helix 3
AA3
A
858 876Right-handed alpha
Helix 4
AA4
A
890 892Right-handed 310
Helix 5
AA5
A
893 901Right-handed alpha
Helix 6
AA6
A
903 907Right-handed 310
Helix 7
AA7
A
923 928Right-handed alpha
Helix 8
AA8
B
827 840Right-handed alpha
Helix 9
AA9
B
841 846Right-handed 310
Helix 10
AB1
B
858 876Right-handed alpha
Helix 11
AB2
B
890 892Right-handed 310
Helix 12
AB3
B
893 901Right-handed alpha
Helix 13
AB4
B
923 928Right-handed alpha
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There are 4 sheets in PDB entry 5LX6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
820 822first strand
Strand 2
A
848 856anti-parallel
Strand 3
A
996 1006anti-parallel
Strand 4
A
941 948anti-parallel
Strand 5
A
883 889anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
918 921first strand
Strand 2
A
987 990anti-parallel
Strand 3
A
977 979anti-parallel
Strand 4
A
953 955parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
820 822first strand
Strand 2
B
848 856anti-parallel
Strand 3
B
996 1006anti-parallel
Strand 4
B
941 948anti-parallel
Strand 5
B
883 889anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
918 921first strand
Strand 2
B
987 990anti-parallel
Strand 3
B
977 979anti-parallel
Strand 4
B
953 955parallel
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