Analysis of interatomic Contacts of Structural Units in PDB entry:
5LYP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LYP entry

There is 1 chain in PDB entry 5LYP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 92THR 228
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 5LYP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
95 115Right-handed alpha
Helix 2
AA2
A
117 132Right-handed alpha
Helix 3
AA3
A
135 149Right-handed alpha
Helix 4
AA4
A
151 166Right-handed alpha
Helix 5
AA5
A
169 183Right-handed alpha
Helix 6
AA6
A
185 201Right-handed alpha
Helix 7
AA7
A
202 204Right-handed 310
Helix 8
AA8
A
205 225Right-handed alpha
Back to top of page
There are no sheets in PDB entry 5LYP
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il