Analysis of interatomic Contacts of Structural Units in PDB entry:
5LZR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LZR entry

There are 2 chains in PDB entry 5LZR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 2PHE 726
B
 TYR 2PHE 726
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 5LZR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 9Right-handed alpha
Helix 2
AA2
A
9 27Right-handed alpha
Helix 3
AA3
A
32 72Right-handed alpha
Helix 4
AA4
A
73 112Right-handed alpha
Helix 5
AA5
A
114 148Right-handed alpha
Helix 6
AA6
A
170 193Right-handed alpha
Helix 7
AA7
A
193 206Right-handed alpha
Helix 8
AA8
A
225 237Right-handed alpha
Helix 9
AA9
A
237 266Right-handed alpha
Helix 10
AB1
A
279 311Right-handed alpha
Helix 11
AB2
A
316 343Right-handed alpha
Helix 12
AB3
A
349 354Right-handed alpha
Helix 13
AB4
A
357 359Right-handed 310
Helix 14
AB5
A
360 383Right-handed alpha
Helix 15
AB6
A
388 398Right-handed alpha
Helix 16
AB7
A
401 417Right-handed alpha
Helix 17
AB8
A
417 449Right-handed alpha
Helix 18
AB9
A
450 474Right-handed alpha
Helix 19
AC1
A
478 520Right-handed alpha
Helix 20
AC2
A
521 522Right-handed 310
Helix 21
AC3
A
523 527Right-handed 310
Helix 22
AC4
A
530 534Right-handed 310
Helix 23
AC5
A
541 575Right-handed alpha
Helix 24
AC6
A
597 630Right-handed alpha
Helix 25
AC7
A
630 668Right-handed alpha
Helix 26
AC8
A
678 697Right-handed alpha
Helix 27
AC9
A
697 724Right-handed alpha
Helix 28
AD1
B
3 9Right-handed alpha
Helix 29
AD2
B
9 27Right-handed alpha
Helix 30
AD3
B
32 72Right-handed alpha
Helix 31
AD4
B
73 109Right-handed alpha
Helix 32
AD5
B
116 148Right-handed alpha
Helix 33
AD6
B
153 158Right-handed alpha
Helix 34
AD7
B
170 193Right-handed alpha
Helix 35
AD8
B
193 206Right-handed alpha
Helix 36
AD9
B
224 237Right-handed alpha
Helix 37
AE1
B
237 266Right-handed alpha
Helix 38
AE2
B
279 311Right-handed alpha
Helix 39
AE3
B
316 344Right-handed alpha
Helix 40
AE4
B
349 354Right-handed alpha
Helix 41
AE5
B
360 383Right-handed alpha
Helix 42
AE6
B
388 398Right-handed alpha
Helix 43
AE7
B
401 417Right-handed alpha
Helix 44
AE8
B
417 448Right-handed alpha
Helix 45
AE9
B
450 475Right-handed alpha
Helix 46
AF1
B
478 520Right-handed alpha
Helix 47
AF2
B
521 522Right-handed 310
Helix 48
AF3
B
523 527Right-handed 310
Helix 49
AF4
B
530 534Right-handed 310
Helix 50
AF5
B
541 583Right-handed alpha
Helix 51
AF6
B
600 610Right-handed alpha
Helix 52
AF7
B
611 630Right-handed alpha
Helix 53
AF8
B
630 668Right-handed alpha
Helix 54
AF9
B
678 697Right-handed alpha
Helix 55
AG1
B
697 724Right-handed alpha
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There are 4 sheets in PDB entry 5LZR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 162first strand
Strand 2
A
168 169anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 270first strand
Strand 2
A
273 276anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 162first strand
Strand 2
B
168 169anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
267 270first strand
Strand 2
B
273 276anti-parallel
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