Analysis of interatomic Contacts of Structural Units in PDB entry:
5M0I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5M0I entry

There are 9 chains in PDB entry 5M0I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 LEU 3GLY 242
C
 LEU 3LYS 245
B
 LEU 3LYS 245
A
 LEU 3LYS 243
E
 G 1 G 28
F
 G 1 G 28
H
 SER 398ARG 405
J
 ILE 397VAL 403
I
 ILE 397VAL 403
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 5M0I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
12 43Right-handed alpha
Helix 2
AA2
D
44 47Right-handed 310
Helix 3
AA3
D
48 72Right-handed alpha
Helix 4
AA4
D
73 78Right-handed 310
Helix 5
AA5
D
91 119Right-handed alpha
Helix 6
AA6
D
119 130Right-handed alpha
Helix 7
AA7
D
131 135Right-handed 310
Helix 8
AA8
D
137 162Right-handed alpha
Helix 9
AA9
D
171 183Right-handed alpha
Helix 10
AB1
D
193 197Right-handed 310
Helix 11
AB2
D
204 242Right-handed alpha
Helix 12
AB3
C
12 43Right-handed alpha
Helix 13
AB4
C
44 47Right-handed 310
Helix 14
AB5
C
48 72Right-handed alpha
Helix 15
AB6
C
73 78Right-handed 310
Helix 16
AB7
C
91 119Right-handed alpha
Helix 17
AB8
C
119 130Right-handed alpha
Helix 18
AB9
C
137 162Right-handed alpha
Helix 19
AC1
C
166 170Right-handed 310
Helix 20
AC2
C
171 183Right-handed alpha
Helix 21
AC3
C
204 241Right-handed alpha
Helix 22
AC4
B
12 43Right-handed alpha
Helix 23
AC5
B
44 47Right-handed 310
Helix 24
AC6
B
48 72Right-handed alpha
Helix 25
AC7
B
73 78Right-handed 310
Helix 26
AC8
B
91 119Right-handed alpha
Helix 27
AC9
B
119 130Right-handed alpha
Helix 28
AD1
B
137 162Right-handed alpha
Helix 29
AD2
B
171 183Right-handed alpha
Helix 30
AD3
B
204 241Right-handed alpha
Helix 31
AD4
A
12 43Right-handed alpha
Helix 32
AD5
A
44 47Right-handed 310
Helix 33
AD6
A
48 72Right-handed alpha
Helix 34
AD7
A
73 78Right-handed 310
Helix 35
AD8
A
91 119Right-handed alpha
Helix 36
AD9
A
119 130Right-handed alpha
Helix 37
AE1
A
131 135Right-handed 310
Helix 38
AE2
A
137 162Right-handed alpha
Helix 39
AE3
A
171 183Right-handed alpha
Helix 40
AE4
A
193 197Right-handed 310
Helix 41
AE5
A
204 242Right-handed alpha
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There are no sheets in PDB entry 5M0I
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