Analysis of interatomic Contacts of Structural Units in PDB entry:
5M0O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5M0O entry

There are 2 chains in PDB entry 5M0O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 4THR 422
C
 HIS -1THR 422
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 5M0O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 20Right-handed alpha
Helix 2
AA2
A
22 32Right-handed alpha
Helix 3
AA3
A
50 59Right-handed alpha
Helix 4
AA4
A
71 78Right-handed alpha
Helix 5
AA5
A
83 87Right-handed 310
Helix 6
AA6
A
88 102Right-handed alpha
Helix 7
AA7
A
104 129Right-handed alpha
Helix 8
AA8
A
134 151Right-handed alpha
Helix 9
AA9
A
155 157Right-handed 310
Helix 10
AB1
A
158 172Right-handed alpha
Helix 11
AB2
A
182 206Right-handed alpha
Helix 12
AB3
A
215 223Right-handed alpha
Helix 13
AB4
A
232 242Right-handed alpha
Helix 14
AB5
A
244 249Right-handed alpha
Helix 15
AB6
A
250 264Right-handed alpha
Helix 16
AB7
A
265 274Right-handed alpha
Helix 17
AB8
A
276 289Right-handed alpha
Helix 18
AB9
A
320 325Right-handed alpha
Helix 19
AC1
A
337 343Right-handed 310
Helix 20
AC2
A
367 385Right-handed alpha
Helix 21
AC3
C
12 20Right-handed alpha
Helix 22
AC4
C
22 32Right-handed alpha
Helix 23
AC5
C
50 59Right-handed alpha
Helix 24
AC6
C
71 78Right-handed alpha
Helix 25
AC7
C
83 87Right-handed 310
Helix 26
AC8
C
88 102Right-handed alpha
Helix 27
AC9
C
104 129Right-handed alpha
Helix 28
AD1
C
134 150Right-handed alpha
Helix 29
AD2
C
155 157Right-handed 310
Helix 30
AD3
C
158 172Right-handed alpha
Helix 31
AD4
C
182 205Right-handed alpha
Helix 32
AD5
C
215 223Right-handed alpha
Helix 33
AD6
C
232 242Right-handed alpha
Helix 34
AD7
C
244 249Right-handed alpha
Helix 35
AD8
C
249 264Right-handed alpha
Helix 36
AD9
C
265 274Right-handed alpha
Helix 37
AE1
C
276 289Right-handed alpha
Helix 38
AE2
C
320 325Right-handed alpha
Helix 39
AE3
C
337 343Right-handed 310
Helix 40
AE4
C
367 385Right-handed alpha
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There are 6 sheets in PDB entry 5M0O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 40first strand
Strand 2
A
44 49anti-parallel
Strand 3
A
315 319parallel
Strand 4
A
294 299anti-parallel
Strand 5
A
64 65anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
411 417anti-parallel
Strand 3
A
386 389anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 305first strand
Strand 2
A
308 310anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 7first strand
Strand 2
C
36 40parallel
Strand 3
C
44 49anti-parallel
Strand 4
C
315 319parallel
Strand 5
C
294 299anti-parallel
Strand 6
C
64 65anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
132 133first strand
Strand 2
C
411 417anti-parallel
Strand 3
C
386 389anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
303 305first strand
Strand 2
C
308 310anti-parallel
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