Analysis of interatomic Contacts of Structural Units in PDB entry:
5M2N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5M2N entry

There is 1 chain in PDB entry 5M2N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3ALA 703
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 5M2N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
468 480Right-handed alpha
Helix 2
AA2
A
538 545Right-handed alpha
Helix 3
AA3
A
663 667Right-handed 310
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There are 14 sheets in PDB entry 5M2N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 11first strand
Strand 2
A
780 786anti-parallel
Strand 3
A
768 775anti-parallel
Strand 4
A
755 760anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 23first strand
Strand 2
A
30 34anti-parallel
Strand 3
A
37 41anti-parallel
Strand 4
A
51 55anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 67first strand
Strand 2
A
73 78anti-parallel
Strand 3
A
83 88anti-parallel
Strand 4
A
94 100anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 113first strand
Strand 2
A
116 121anti-parallel
Strand 3
A
125 131anti-parallel
Strand 4
A
138 145anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 162first strand
Strand 2
A
165 172anti-parallel
Strand 3
A
177 185anti-parallel
Strand 4
A
188 198anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 210first strand
Strand 2
A
218 225anti-parallel
Strand 3
A
229 237anti-parallel
Strand 4
A
267 278anti-parallel
Strand 5
A
259 264anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 289first strand
Strand 2
A
296 300anti-parallel
Strand 3
A
304 310anti-parallel
Strand 4
A
317 324anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 349first strand
Strand 2
A
352 358anti-parallel
Strand 3
A
364 369anti-parallel
Strand 4
A
376 381anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 393first strand
Strand 2
A
400 404anti-parallel
Strand 3
A
408 414anti-parallel
Strand 4
A
429 436anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
442 447first strand
Strand 2
A
452 457anti-parallel
Strand 3
A
461 466anti-parallel
Strand 4
A
550 555anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
561 566first strand
Strand 2
A
572 577anti-parallel
Strand 3
A
586 591anti-parallel
Strand 4
A
597 603anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
609 614first strand
Strand 2
A
620 625anti-parallel
Strand 3
A
630 636anti-parallel
Strand 4
A
641 648anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
656 661first strand
Strand 2
A
669 674anti-parallel
Strand 3
A
678 685anti-parallel
Strand 4
A
691 699anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
704 709first strand
Strand 2
A
718 724anti-parallel
Strand 3
A
729 735anti-parallel
Strand 4
A
738 744anti-parallel
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