Analysis of interatomic Contacts of Structural Units in PDB entry:
5M6G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5M6G entry

There is 1 chain in PDB entry 5M6G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 37GLY 615
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5M6G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 42Right-handed 310
Helix 2
AA2
A
46 58Right-handed alpha
Helix 3
AA3
A
59 67Right-handed alpha
Helix 4
AA4
A
73 75Right-handed 310
Helix 5
AA5
A
76 83Right-handed alpha
Helix 6
AA6
A
100 117Right-handed alpha
Helix 7
AA7
A
145 152Right-handed alpha
Helix 8
AA8
A
154 171Right-handed alpha
Helix 9
AA9
A
192 196Right-handed 310
Helix 10
AB1
A
200 207Right-handed alpha
Helix 11
AB2
A
208 216Right-handed alpha
Helix 12
AB3
A
235 243Right-handed 310
Helix 13
AB4
A
251 259Right-handed alpha
Helix 14
AB5
A
260 269Right-handed alpha
Helix 15
AB6
A
289 294Right-handed alpha
Helix 16
AB7
A
313 317Right-handed 310
Helix 17
AB8
A
324 335Right-handed alpha
Helix 18
AB9
A
344 358Right-handed alpha
Helix 19
AC1
A
362 380Right-handed alpha
Helix 20
AC2
A
389 396Right-handed 310
Helix 21
AC3
A
398 413Right-handed alpha
Helix 22
AC4
A
440 446Right-handed alpha
Helix 23
AC5
A
464 473Right-handed alpha
Helix 24
AC6
A
504 509Right-handed 310
Helix 25
AC7
A
517 529Right-handed alpha
Helix 26
AC8
A
549 553Right-handed 310
Helix 27
AC9
A
566 574Right-handed alpha
Helix 28
AD1
A
590 594Right-handed 310
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There are 4 sheets in PDB entry 5M6G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 177first strand
Strand 2
A
125 128parallel
Strand 3
A
87 90parallel
Strand 4
A
68 71parallel
Strand 5
A
339 341parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 233first strand
Strand 2
A
273 276parallel
Strand 3
A
306 308parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 248first strand
Strand 2
A
280 281parallel
Strand 3
A
284 285anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 418first strand
Strand 2
A
555 560anti-parallel
Strand 3
A
534 539parallel
Strand 4
A
493 499parallel
Strand 5
A
431 434parallel
Strand 6
A
478 480parallel
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