Analysis of interatomic Contacts of Structural Units in PDB entry:
5M73


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5M73 entry

There are 6 chains in PDB entry 5M73 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 G 106 A 249
B
 ASP 11ARG 118
C
 HIS 58GLN 254
D
 LYS 557GLN 603
E
 G 106 A 249
F
 ARG 14LEU 115
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 5M73. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
11 15Right-handed 310
Helix 2
AA2
B
19 24Right-handed 310
Helix 3
AA3
B
28 32Right-handed 310
Helix 4
AA4
B
45 56Right-handed alpha
Helix 5
AA5
B
100 112Right-handed alpha
Helix 6
AA6
B
113 115Right-handed 310
Helix 7
AA7
C
61 73Right-handed alpha
Helix 8
AA8
C
79 98Right-handed alpha
Helix 9
AA9
C
115 121Right-handed 310
Helix 10
AB1
C
123 146Right-handed alpha
Helix 11
AB2
C
147 149Right-handed 310
Helix 12
AB3
C
150 173Right-handed alpha
Helix 13
AB4
C
179 201Right-handed alpha
Helix 14
AB5
C
203 223Right-handed alpha
Helix 15
AB6
C
226 252Right-handed alpha
Helix 16
AB7
D
562 567Right-handed alpha
Helix 17
AB8
D
589 603Right-handed alpha
Helix 18
AB9
F
19 24Right-handed 310
Helix 19
AC1
F
45 55Right-handed alpha
Helix 20
AC2
F
75 77Right-handed 310
Helix 21
AC3
F
100 117Right-handed alpha
Helix 22
AC4
G
61 73Right-handed alpha
Helix 23
AC5
G
74 78Right-handed 310
Helix 24
AC6
G
79 98Right-handed alpha
Helix 25
AC7
G
115 121Right-handed 310
Helix 26
AC8
G
122 146Right-handed alpha
Helix 27
AC9
G
147 149Right-handed 310
Helix 28
AD1
G
150 174Right-handed alpha
Helix 29
AD2
G
179 201Right-handed alpha
Helix 30
AD3
G
203 225Right-handed alpha
Helix 31
AD4
G
226 250Right-handed alpha
Helix 32
AD5
H
589 603Right-handed alpha
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There are 3 sheets in PDB entry 5M73. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 18first strand
Strand 2
B
81 84anti-parallel
Strand 3
B
60 63anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
16 18first strand
Strand 2
F
79 84anti-parallel
Strand 3
F
60 67anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
103 104first strand
Strand 2
G
107 108anti-parallel
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