Analysis of interatomic Contacts of Structural Units in PDB entry:
5M9E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5M9E entry

There are 8 chains in PDB entry 5M9E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 173THR 241
B
 GLY 172GLU 242
C
 ALA 174THR 241
D
 SER 173GLU 242
E
 ARG 833SER 851
F
 ARG 833PHE 852
G
 ARG 834GLN 846
H
 GLY 838ARG 849
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 5M9E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
174 221Right-handed alpha
Helix 2
AA2
A
226 239Right-handed alpha
Helix 3
AA3
B
174 221Right-handed alpha
Helix 4
AA4
B
226 239Right-handed alpha
Helix 5
AA5
C
175 221Right-handed alpha
Helix 6
AA6
C
226 239Right-handed alpha
Helix 7
AA7
D
174 221Right-handed alpha
Helix 8
AA8
D
226 239Right-handed alpha
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There are no sheets in PDB entry 5M9E
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