Analysis of interatomic Contacts of Structural Units in PDB entry:
5MAB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MAB entry

There are 3 chains in PDB entry 5MAB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1GLU 259
B
 ASP 1GLU 259
C
 ARG 3GLU 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 49 helices in PDB entry 5MAB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 16Right-handed alpha
Helix 2
AA2
A
24 31Right-handed alpha
Helix 3
AA3
A
39 49Right-handed alpha
Helix 4
AA4
A
58 63Right-handed alpha
Helix 5
AA5
A
71 75Right-handed 310
Helix 6
AA6
A
79 86Right-handed alpha
Helix 7
AA7
A
101 104Right-handed 310
Helix 8
AA8
A
105 113Right-handed alpha
Helix 9
AA9
A
128 140Right-handed alpha
Helix 10
AB1
A
145 152Right-handed alpha
Helix 11
AB2
A
153 157Right-handed 310
Helix 12
AB3
A
168 172Right-handed 310
Helix 13
AB4
A
181 185Right-handed 310
Helix 14
AB5
A
189 196Right-handed alpha
Helix 15
AB6
A
215 218Right-handed 310
Helix 16
AB7
A
219 227Right-handed alpha
Helix 17
AB8
A
242 254Right-handed alpha
Helix 18
AB9
B
4 16Right-handed alpha
Helix 19
AC1
B
24 31Right-handed alpha
Helix 20
AC2
B
39 49Right-handed alpha
Helix 21
AC3
B
58 63Right-handed alpha
Helix 22
AC4
B
71 75Right-handed 310
Helix 23
AC5
B
79 86Right-handed alpha
Helix 24
AC6
B
105 113Right-handed alpha
Helix 25
AC7
B
128 140Right-handed alpha
Helix 26
AC8
B
145 152Right-handed alpha
Helix 27
AC9
B
153 157Right-handed 310
Helix 28
AD1
B
168 172Right-handed 310
Helix 29
AD2
B
181 185Right-handed 310
Helix 30
AD3
B
189 196Right-handed alpha
Helix 31
AD4
B
219 227Right-handed alpha
Helix 32
AD5
B
242 254Right-handed alpha
Helix 33
AD6
C
4 15Right-handed alpha
Helix 34
AD7
C
24 31Right-handed alpha
Helix 35
AD8
C
39 49Right-handed alpha
Helix 36
AD9
C
58 63Right-handed alpha
Helix 37
AE1
C
71 75Right-handed 310
Helix 38
AE2
C
79 86Right-handed alpha
Helix 39
AE3
C
101 104Right-handed 310
Helix 40
AE4
C
105 113Right-handed alpha
Helix 41
AE5
C
128 140Right-handed alpha
Helix 42
AE6
C
145 152Right-handed alpha
Helix 43
AE7
C
153 157Right-handed 310
Helix 44
AE8
C
168 172Right-handed 310
Helix 45
AE9
C
181 185Right-handed 310
Helix 46
AF1
C
189 196Right-handed alpha
Helix 47
AF2
C
215 218Right-handed 310
Helix 48
AF3
C
219 227Right-handed alpha
Helix 49
AF4
C
242 254Right-handed alpha
Back to top of page
There are no sheets in PDB entry 5MAB
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il