Analysis of interatomic Contacts of Structural Units in PDB entry:
5MAC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MAC entry

There are 10 chains in PDB entry 5MAC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 192
A
 ASN 194ASN 473
B
 MET 1VAL 192
B
 ASN 194ASN 473
C
 MET 1VAL 192
C
 ASN 194LEU 472
D
 MET 1VAL 192
D
 ASN 194ASN 473
E
 SER 2VAL 192
E
 ASN 194ASN 473
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are122 helices in PDB entry 5MAC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 11Right-handed alpha
Helix 2
AA2
A
13 18Right-handed alpha
Helix 3
AA3
A
46 58Right-handed alpha
Helix 4
AA4
A
70 75Right-handed alpha
Helix 5
AA5
A
97 99Right-handed 310
Helix 6
AA6
A
104 113Right-handed alpha
Helix 7
AA7
A
114 119Right-handed 310
Helix 8
AA8
A
133 138Right-handed alpha
Helix 9
AA9
A
146 155Right-handed alpha
Helix 10
AB1
A
173 187Right-handed alpha
Helix 11
AB2
A
205 225Right-handed alpha
Helix 12
AB3
A
238 251Right-handed alpha
Helix 13
AB4
A
265 269Right-handed alpha
Helix 14
AB5
A
269 280Right-handed alpha
Helix 15
AB6
A
292 297Right-handed alpha
Helix 16
AB7
A
305 317Right-handed alpha
Helix 17
AB8
A
334 347Right-handed alpha
Helix 18
AB9
A
366 378Right-handed alpha
Helix 19
AC1
A
386 390Right-handed 310
Helix 20
AC2
A
403 405Right-handed 310
Helix 21
AC3
A
406 415Right-handed alpha
Helix 22
AC4
A
424 429Right-handed alpha
Helix 23
AC5
A
433 451Right-handed alpha
Helix 24
AC6
A
453 458Right-handed alpha
Helix 25
AC7
A
461 472Right-handed alpha
Helix 26
AC8
B
2 11Right-handed alpha
Helix 27
AC9
B
13 18Right-handed alpha
Helix 28
AD1
B
26 30Right-handed 310
Helix 29
AD2
B
46 58Right-handed alpha
Helix 30
AD3
B
70 75Right-handed alpha
Helix 31
AD4
B
97 99Right-handed 310
Helix 32
AD5
B
104 113Right-handed alpha
Helix 33
AD6
B
114 119Right-handed 310
Helix 34
AD7
B
133 138Right-handed alpha
Helix 35
AD8
B
146 155Right-handed alpha
Helix 36
AD9
B
173 187Right-handed alpha
Helix 37
AE1
B
205 225Right-handed alpha
Helix 38
AE2
B
238 251Right-handed alpha
Helix 39
AE3
B
265 269Right-handed alpha
Helix 40
AE4
B
269 280Right-handed alpha
Helix 41
AE5
B
292 297Right-handed alpha
Helix 42
AE6
B
305 317Right-handed alpha
Helix 43
AE7
B
334 347Right-handed alpha
Helix 44
AE8
B
366 378Right-handed alpha
Helix 45
AE9
B
386 390Right-handed 310
Helix 46
AF1
B
403 405Right-handed 310
Helix 47
AF2
B
406 415Right-handed alpha
Helix 48
AF3
B
424 429Right-handed alpha
Helix 49
AF4
B
433 450Right-handed alpha
Helix 50
AF5
B
453 458Right-handed alpha
Helix 51
AF6
B
461 473Right-handed alpha
Helix 52
AF7
C
2 11Right-handed alpha
Helix 53
AF8
C
13 18Right-handed alpha
Helix 54
AF9
C
46 58Right-handed alpha
Helix 55
AG1
C
70 75Right-handed alpha
Helix 56
AG2
C
97 99Right-handed 310
Helix 57
AG3
C
104 113Right-handed alpha
Helix 58
AG4
C
114 119Right-handed 310
Helix 59
AG5
C
133 138Right-handed alpha
Helix 60
AG6
C
146 155Right-handed alpha
Helix 61
AG7
C
173 187Right-handed alpha
Helix 62
AG8
C
205 225Right-handed alpha
Helix 63
AG9
C
238 251Right-handed alpha
Helix 64
AH1
C
269 280Right-handed alpha
Helix 65
AH2
C
292 297Right-handed alpha
Helix 66
AH3
C
305 317Right-handed alpha
Helix 67
AH4
C
334 347Right-handed alpha
Helix 68
AH5
C
366 378Right-handed alpha
Helix 69
AH6
C
386 390Right-handed 310
Helix 70
AH7
C
406 415Right-handed alpha
Helix 71
AH8
C
424 429Right-handed alpha
Helix 72
AH9
C
433 450Right-handed alpha
Helix 73
AI1
C
453 458Right-handed alpha
Helix 74
AI2
C
461 469Right-handed alpha
Helix 75
AI3
D
2 11Right-handed alpha
Helix 76
AI4
D
15 20Right-handed 310
Helix 77
AI5
D
26 30Right-handed 310
Helix 78
AI6
D
46 58Right-handed alpha
Helix 79
AI7
D
70 75Right-handed alpha
Helix 80
AI8
D
97 99Right-handed 310
Helix 81
AI9
D
104 113Right-handed alpha
Helix 82
AJ1
D
114 119Right-handed 310
Helix 83
AJ2
D
133 138Right-handed alpha
Helix 84
AJ3
D
146 155Right-handed alpha
Helix 85
AJ4
D
173 187Right-handed alpha
Helix 86
AJ5
D
205 225Right-handed alpha
Helix 87
AJ6
D
238 251Right-handed alpha
Helix 88
AJ7
D
269 280Right-handed alpha
Helix 89
AJ8
D
292 297Right-handed alpha
Helix 90
AJ9
D
305 317Right-handed alpha
Helix 91
AK1
D
334 347Right-handed alpha
Helix 92
AK2
D
366 378Right-handed alpha
Helix 93
AK3
D
386 390Right-handed 310
Helix 94
AK4
D
403 405Right-handed 310
Helix 95
AK5
D
406 415Right-handed alpha
Helix 96
AK6
D
424 429Right-handed alpha
Helix 97
AK7
D
433 450Right-handed alpha
Helix 98
AK8
D
453 458Right-handed alpha
Helix 99
AK9
D
461 473Right-handed alpha
Helix 100
AL1
E
3 11Right-handed alpha
Helix 101
AL2
E
15 20Right-handed 310
Helix 102
AL3
E
46 58Right-handed alpha
Helix 103
AL4
E
70 75Right-handed alpha
Helix 104
AL5
E
97 99Right-handed 310
Helix 105
AL6
E
104 113Right-handed alpha
Helix 106
AL7
E
114 119Right-handed 310
Helix 107
AL8
E
133 138Right-handed alpha
Helix 108
AL9
E
146 155Right-handed alpha
Helix 109
AM1
E
173 187Right-handed alpha
Helix 110
AM2
E
205 225Right-handed alpha
Helix 111
AM3
E
238 251Right-handed alpha
Helix 112
AM4
E
269 280Right-handed alpha
Helix 113
AM5
E
292 297Right-handed alpha
Helix 114
AM6
E
305 317Right-handed alpha
Helix 115
AM7
E
334 347Right-handed alpha
Helix 116
AM8
E
366 378Right-handed alpha
Helix 117
AM9
E
403 405Right-handed 310
Helix 118
AN1
E
406 415Right-handed alpha
Helix 119
AN2
E
424 429Right-handed alpha
Helix 120
AN3
E
433 451Right-handed alpha
Helix 121
AN4
E
453 458Right-handed alpha
Helix 122
AN5
E
461 472Right-handed alpha
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There are 15 sheets in PDB entry 5MAC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 84first strand
Strand 2
A
89 95anti-parallel
Strand 3
A
32 41anti-parallel
Strand 4
A
122 131anti-parallel
Strand 5
A
302 304parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 165first strand
Strand 2
A
191 193parallel
Strand 3
A
229 233parallel
Strand 4
A
259 264parallel
Strand 5
A
284 288parallel
Strand 6
A
320 322parallel
Strand 7
A
395 398parallel
Strand 8
A
420 422parallel
Strand 9
A
161 165parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 350first strand
Strand 2
A
357 358anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 84first strand
Strand 2
B
89 95anti-parallel
Strand 3
B
32 41anti-parallel
Strand 4
B
122 131anti-parallel
Strand 5
B
302 304parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 165first strand
Strand 2
B
191 193parallel
Strand 3
B
229 233parallel
Strand 4
B
259 264parallel
Strand 5
B
284 288parallel
Strand 6
B
320 322parallel
Strand 7
B
395 399parallel
Strand 8
B
420 422parallel
Strand 9
B
161 165parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
349 350first strand
Strand 2
B
357 358anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
79 84first strand
Strand 2
C
89 95anti-parallel
Strand 3
C
32 41anti-parallel
Strand 4
C
122 131anti-parallel
Strand 5
C
302 304parallel
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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
161 165first strand
Strand 2
C
191 193parallel
Strand 3
C
229 233parallel
Strand 4
C
259 264parallel
Strand 5
C
284 288parallel
Strand 6
C
320 322parallel
Strand 7
C
395 399parallel
Strand 8
C
420 422parallel
Strand 9
C
161 165parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
349 350first strand
Strand 2
C
357 358anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
79 84first strand
Strand 2
D
89 95anti-parallel
Strand 3
D
32 41anti-parallel
Strand 4
D
122 131anti-parallel
Strand 5
D
302 304parallel
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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
161 165first strand
Strand 2
D
191 193parallel
Strand 3
D
229 233parallel
Strand 4
D
259 264parallel
Strand 5
D
284 288parallel
Strand 6
D
320 322parallel
Strand 7
D
395 399parallel
Strand 8
D
420 422parallel
Strand 9
D
161 165parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
349 350first strand
Strand 2
D
357 358anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
79 84first strand
Strand 2
E
89 95anti-parallel
Strand 3
E
32 41anti-parallel
Strand 4
E
122 131anti-parallel
Strand 5
E
302 304parallel
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There are 9 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
161 165first strand
Strand 2
E
191 193parallel
Strand 3
E
229 233parallel
Strand 4
E
259 264parallel
Strand 5
E
284 288parallel
Strand 6
E
320 322parallel
Strand 7
E
395 399parallel
Strand 8
E
420 422parallel
Strand 9
E
161 165parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
349 350first strand
Strand 2
E
357 358anti-parallel
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