Analysis of interatomic Contacts of Structural Units in PDB entry:
5MFK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MFK entry

There are 4 chains in PDB entry 5MFK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 11ASN 249
B
 SER 11SER 250
C
 LYS 1ARG 8
D
 ARG 1ARG 1
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 5MFK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 19Right-handed alpha
Helix 2
AA2
A
20 22Right-handed 310
Helix 3
AA3
A
24 40Right-handed alpha
Helix 4
AA4
A
42 52Right-handed alpha
Helix 5
AA5
A
54 61Right-handed alpha
Helix 6
AA6
A
66 81Right-handed alpha
Helix 7
AA7
A
84 94Right-handed alpha
Helix 8
AA8
A
96 103Right-handed alpha
Helix 9
AA9
A
104 106Right-handed 310
Helix 10
AB1
A
108 123Right-handed alpha
Helix 11
AB2
A
126 136Right-handed alpha
Helix 12
AB3
A
138 145Right-handed alpha
Helix 13
AB4
A
150 166Right-handed alpha
Helix 14
AB5
A
168 178Right-handed alpha
Helix 15
AB6
A
180 187Right-handed alpha
Helix 16
AB7
A
188 190Right-handed 310
Helix 17
AB8
A
192 208Right-handed alpha
Helix 18
AB9
A
210 221Right-handed alpha
Helix 19
AC1
A
221 229Right-handed alpha
Helix 20
AC2
A
230 232Right-handed 310
Helix 21
AC3
A
234 249Right-handed alpha
Helix 22
AC4
B
12 19Right-handed alpha
Helix 23
AC5
B
20 22Right-handed 310
Helix 24
AC6
B
24 40Right-handed alpha
Helix 25
AC7
B
42 52Right-handed alpha
Helix 26
AC8
B
54 61Right-handed alpha
Helix 27
AC9
B
62 64Right-handed 310
Helix 28
AD1
B
66 81Right-handed alpha
Helix 29
AD2
B
84 94Right-handed alpha
Helix 30
AD3
B
96 103Right-handed alpha
Helix 31
AD4
B
104 106Right-handed 310
Helix 32
AD5
B
108 124Right-handed alpha
Helix 33
AD6
B
126 136Right-handed alpha
Helix 34
AD7
B
138 145Right-handed alpha
Helix 35
AD8
B
150 166Right-handed alpha
Helix 36
AD9
B
168 178Right-handed alpha
Helix 37
AE1
B
180 187Right-handed alpha
Helix 38
AE2
B
188 190Right-handed 310
Helix 39
AE3
B
192 209Right-handed alpha
Helix 40
AE4
B
210 221Right-handed alpha
Helix 41
AE5
B
221 229Right-handed alpha
Helix 42
AE6
B
230 232Right-handed 310
Helix 43
AE7
B
234 250Right-handed alpha
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There are no sheets in PDB entry 5MFK
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