Analysis of interatomic Contacts of Structural Units in PDB entry:
5MHF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5MHF entry

There are 29 chains in PDB entry 5MHF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 61	PRO 110
A	PRO 112	PRO 130
A	LEU 132	LEU 226
A	SER 228	LEU 303
A	TRP 305	PHE 365
A	GLU 367	GLU 370
A	THR 372	LEU 375
A	GLU 377	GLU 377
A	GLY 379	THR 412
A	ASP 422	HIS 518
A	LEU 520	ARG 532
A	ALA 534	PRO 572
A	THR 574	LEU 661
A	SER 663	TYR 735
A	GLN 737	ALA 778
A	LEU 780	SER 838
B	LEU 61	PRO 110
B	PRO 112	PRO 130
B	LEU 132	LEU 226
B	SER 228	LEU 303
B	TRP 305	PHE 365
B	GLU 367	GLU 370
B	THR 372	LEU 375
B	GLU 377	GLU 377
B	GLY 379	THR 412
B	ASP 422	HIS 518
B	LEU 520	ARG 532
B	ALA 534	PRO 572
B	THR 574	ARG 593

There are 94 helices in PDB entry 5MHF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	62	70	Right-handed alpha
Helix 2	AA2	A	89	92	Right-handed 310
Helix 3	AA3	A	268	270	Right-handed 310
Helix 4	AA4	A	271	280	Right-handed alpha
Helix 5	AA5	A	350	374	Right-handed alpha
Helix 6	AA6	A	381	398	Right-handed alpha
Helix 7	AA7	A	446	460	Right-handed alpha
Helix 8	AA8	A	460	473	Right-handed alpha
Helix 9	AA9	A	488	493	Right-handed alpha
Helix 10	AB1	A	496	500	Right-handed 310
Helix 11	AB2	A	512	523	Right-handed alpha
Helix 12	AB3	A	524	549	Right-handed alpha
Helix 13	AB4	A	574	578	Right-handed 310
Helix 14	AB5	A	594	616	Right-handed alpha
Helix 15	AB6	A	617	633	Right-handed alpha
Helix 16	AB7	A	633	641	Right-handed alpha
Helix 17	AB8	A	688	690	Right-handed 310
Helix 18	AB9	A	691	696	Right-handed alpha
Helix 19	AC1	A	705	715	Right-handed alpha
Helix 20	AC2	A	752	767	Right-handed alpha
Helix 21	AC3	A	773	800	Right-handed alpha
Helix 22	AC4	A	821	824	Right-handed 310
Helix 23	AC5	A	825	832	Right-handed alpha
Helix 24	AC6	B	62	70	Right-handed alpha
Helix 25	AC7	B	89	92	Right-handed 310
Helix 26	AC8	B	268	270	Right-handed 310
Helix 27	AC9	B	271	280	Right-handed alpha
Helix 28	AD1	B	350	374	Right-handed alpha
Helix 29	AD2	B	381	398	Right-handed alpha
Helix 30	AD3	B	446	460	Right-handed alpha
Helix 31	AD4	B	460	473	Right-handed alpha
Helix 32	AD5	B	488	493	Right-handed alpha
Helix 33	AD6	B	496	500	Right-handed 310
Helix 34	AD7	B	512	523	Right-handed alpha
Helix 35	AD8	B	524	549	Right-handed alpha
Helix 36	AD9	B	574	578	Right-handed 310
Helix 37	AE1	B	594	616	Right-handed alpha
Helix 38	AE2	B	617	633	Right-handed alpha
Helix 39	AE3	B	633	641	Right-handed alpha
Helix 40	AE4	B	691	696	Right-handed alpha
Helix 41	AE5	B	705	715	Right-handed alpha
Helix 42	AE6	B	752	767	Right-handed alpha
Helix 43	AE7	B	773	800	Right-handed alpha
Helix 44	AE8	B	821	824	Right-handed 310
Helix 45	AE9	B	825	832	Right-handed alpha
Helix 46	AF1	C	58	70	Right-handed alpha
Helix 47	AF2	C	89	92	Right-handed 310
Helix 48	AF3	C	268	270	Right-handed 310
Helix 49	AF4	C	271	280	Right-handed alpha
Helix 50	AF5	C	337	340	Right-handed 310
Helix 51	AF6	C	350	374	Right-handed alpha
Helix 52	AF7	C	381	397	Right-handed alpha
Helix 53	AF8	C	446	460	Right-handed alpha
Helix 54	AF9	C	460	473	Right-handed alpha
Helix 55	AG1	C	488	493	Right-handed alpha
Helix 56	AG2	C	496	500	Right-handed 310
Helix 57	AG3	C	512	523	Right-handed alpha
Helix 58	AG4	C	524	549	Right-handed alpha
Helix 59	AG5	C	574	578	Right-handed 310
Helix 60	AG6	C	594	616	Right-handed alpha
Helix 61	AG7	C	617	633	Right-handed alpha
Helix 62	AG8	C	633	641	Right-handed alpha
Helix 63	AG9	C	688	690	Right-handed 310
Helix 64	AH1	C	691	696	Right-handed alpha
Helix 65	AH2	C	705	715	Right-handed alpha
Helix 66	AH3	C	752	767	Right-handed alpha
Helix 67	AH4	C	773	800	Right-handed alpha
Helix 68	AH5	C	821	824	Right-handed 310
Helix 69	AH6	C	825	832	Right-handed alpha
Helix 70	AH7	D	58	70	Right-handed alpha
Helix 71	AH8	D	89	92	Right-handed 310
Helix 72	AH9	D	268	270	Right-handed 310
Helix 73	AI1	D	271	280	Right-handed alpha
Helix 74	AI2	D	337	340	Right-handed 310
Helix 75	AI3	D	341	346	Right-handed 310
Helix 76	AI4	D	350	374	Right-handed alpha
Helix 77	AI5	D	381	397	Right-handed alpha
Helix 78	AI6	D	446	460	Right-handed alpha
Helix 79	AI7	D	460	473	Right-handed alpha
Helix 80	AI8	D	488	493	Right-handed alpha
Helix 81	AI9	D	496	500	Right-handed 310
Helix 82	AJ1	D	512	523	Right-handed alpha
Helix 83	AJ2	D	524	549	Right-handed alpha
Helix 84	AJ3	D	574	578	Right-handed 310
Helix 85	AJ4	D	594	616	Right-handed alpha
Helix 86	AJ5	D	617	633	Right-handed alpha
Helix 87	AJ6	D	633	641	Right-handed alpha
Helix 88	AJ7	D	688	690	Right-handed 310
Helix 89	AJ8	D	691	696	Right-handed alpha
Helix 90	AJ9	D	705	715	Right-handed alpha
Helix 91	AK1	D	752	767	Right-handed alpha
Helix 92	AK2	D	773	800	Right-handed alpha
Helix 93	AK3	D	821	824	Right-handed 310
Helix 94	AK4	D	825	832	Right-handed alpha

There are 46 sheets in PDB entry 5MHF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	94	95	first strand
Strand 2	A	104	107	anti-parallel
Strand 3	A	114	121	anti-parallel
Strand 4	A	201	209	anti-parallel
Strand 5	A	315	324	anti-parallel
Strand 6	A	258	265	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	150	first strand
Strand 2	A	155	162	anti-parallel
Strand 3	A	165	174	anti-parallel
Strand 4	A	182	191	anti-parallel
Strand 5	A	327	335	anti-parallel
Strand 6	A	237	243	anti-parallel
Strand 7	A	228	233	anti-parallel
Strand 8	A	217	219	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	282	286	first strand
Strand 2	A	294	298	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	400	404	first strand
Strand 2	A	429	433	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	424	425	first strand
Strand 2	A	407	409	anti-parallel
Strand 3	A	502	503	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	444	445	first strand
Strand 2	A	484	485	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	642	643	first strand
Strand 2	A	648	649	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	652	655	first strand
Strand 2	A	679	682	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	659	664	first strand
Strand 2	A	668	673	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	720	721	first strand
Strand 2	A	724	725	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	805	806	first strand
Strand 2	A	813	814	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	94	95	first strand
Strand 2	B	104	107	anti-parallel
Strand 3	B	114	121	anti-parallel
Strand 4	B	201	209	anti-parallel
Strand 5	B	315	324	anti-parallel
Strand 6	B	258	265	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	145	150	first strand
Strand 2	B	155	162	anti-parallel
Strand 3	B	165	174	anti-parallel
Strand 4	B	182	191	anti-parallel
Strand 5	B	327	335	anti-parallel
Strand 6	B	237	243	anti-parallel
Strand 7	B	228	233	anti-parallel
Strand 8	B	217	219	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	282	286	first strand
Strand 2	B	294	298	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	400	404	first strand
Strand 2	B	429	433	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	424	425	first strand
Strand 2	B	407	409	anti-parallel
Strand 3	B	502	503	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	444	445	first strand
Strand 2	B	484	485	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	642	643	first strand
Strand 2	B	648	649	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	652	655	first strand
Strand 2	B	679	682	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	659	664	first strand
Strand 2	B	668	673	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	720	721	first strand
Strand 2	B	724	725	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	805	806	first strand
Strand 2	B	813	814	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	94	95	first strand
Strand 2	C	104	107	anti-parallel
Strand 3	C	114	121	anti-parallel
Strand 4	C	132	133	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	94	95	first strand
Strand 2	C	104	107	anti-parallel
Strand 3	C	114	121	anti-parallel
Strand 4	C	201	209	anti-parallel
Strand 5	C	315	324	anti-parallel
Strand 6	C	258	265	anti-parallel

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There are 8 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	150	first strand
Strand 2	C	155	162	anti-parallel
Strand 3	C	165	174	anti-parallel
Strand 4	C	182	191	anti-parallel
Strand 5	C	327	335	anti-parallel
Strand 6	C	237	243	anti-parallel
Strand 7	C	228	233	anti-parallel
Strand 8	C	217	219	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	282	286	first strand
Strand 2	C	294	298	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	400	404	first strand
Strand 2	C	429	433	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	424	425	first strand
Strand 2	C	407	409	anti-parallel
Strand 3	C	502	503	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	444	445	first strand
Strand 2	C	484	485	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	642	643	first strand
Strand 2	C	648	649	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	652	655	first strand
Strand 2	C	679	682	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	659	664	first strand
Strand 2	C	668	673	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	720	721	first strand
Strand 2	C	724	725	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	805	806	first strand
Strand 2	C	813	814	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	94	95	first strand
Strand 2	D	104	107	anti-parallel
Strand 3	D	114	122	anti-parallel
Strand 4	D	132	133	anti-parallel

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There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	94	95	first strand
Strand 2	D	104	107	anti-parallel
Strand 3	D	114	122	anti-parallel
Strand 4	D	201	209	anti-parallel
Strand 5	D	315	324	anti-parallel
Strand 6	D	258	265	anti-parallel

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There are 8 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	145	150	first strand
Strand 2	D	155	162	anti-parallel
Strand 3	D	165	174	anti-parallel
Strand 4	D	182	191	anti-parallel
Strand 5	D	327	335	anti-parallel
Strand 6	D	237	243	anti-parallel
Strand 7	D	228	233	anti-parallel
Strand 8	D	217	219	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	282	286	first strand
Strand 2	D	294	298	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	400	404	first strand
Strand 2	D	429	433	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	424	425	first strand
Strand 2	D	407	409	anti-parallel
Strand 3	D	502	503	parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	444	445	first strand
Strand 2	D	484	485	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	642	643	first strand
Strand 2	D	648	649	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	652	655	first strand
Strand 2	D	679	682	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	659	664	first strand
Strand 2	D	668	673	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	720	721	first strand
Strand 2	D	724	725	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	805	806	first strand
Strand 2	D	813	814	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5MHF

Analysis of interatomic Contacts of Structural Units in PDB entry:
5MHF