Analysis of interatomic Contacts of Structural Units in PDB entry:
5MHK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MHK entry

There are 9 chains in PDB entry 5MHK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
G
 G 21 G 39
H
 C 1 G 18
E
 C 25 G 39
F
 C 1 G 16
A
 GLY 300LEU 485
C
 GLU 292THR 486
D
 ARG 289LEU 485
B
 GLN 287LEU 485
J
 PHE 283THR 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 5MHK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
300 304Right-handed 310
Helix 2
AA2
A
342 356Right-handed alpha
Helix 3
AA3
A
363 367Right-handed 310
Helix 4
AA4
A
368 381Right-handed alpha
Helix 5
AA5
A
386 393Right-handed alpha
Helix 6
AA6
A
397 411Right-handed alpha
Helix 7
AA7
A
431 439Right-handed alpha
Helix 8
AA8
A
440 442Right-handed 310
Helix 9
AA9
A
443 455Right-handed alpha
Helix 10
AB1
A
459 485Right-handed alpha
Helix 11
AB2
C
294 299Right-handed alpha
Helix 12
AB3
C
300 305Right-handed alpha
Helix 13
AB4
C
342 356Right-handed alpha
Helix 14
AB5
C
363 367Right-handed 310
Helix 15
AB6
C
368 380Right-handed alpha
Helix 16
AB7
C
386 393Right-handed alpha
Helix 17
AB8
C
397 412Right-handed alpha
Helix 18
AB9
C
431 439Right-handed alpha
Helix 19
AC1
C
440 442Right-handed 310
Helix 20
AC2
C
443 455Right-handed alpha
Helix 21
AC3
C
459 485Right-handed alpha
Helix 22
AC4
D
294 299Right-handed alpha
Helix 23
AC5
D
300 305Right-handed alpha
Helix 24
AC6
D
342 356Right-handed alpha
Helix 25
AC7
D
363 367Right-handed 310
Helix 26
AC8
D
368 381Right-handed alpha
Helix 27
AC9
D
386 393Right-handed alpha
Helix 28
AD1
D
397 411Right-handed alpha
Helix 29
AD2
D
431 439Right-handed alpha
Helix 30
AD3
D
440 442Right-handed 310
Helix 31
AD4
D
443 455Right-handed alpha
Helix 32
AD5
D
459 485Right-handed alpha
Helix 33
AD6
B
294 299Right-handed alpha
Helix 34
AD7
B
300 305Right-handed alpha
Helix 35
AD8
B
342 356Right-handed alpha
Helix 36
AD9
B
363 367Right-handed 310
Helix 37
AE1
B
368 381Right-handed alpha
Helix 38
AE2
B
386 393Right-handed alpha
Helix 39
AE3
B
397 412Right-handed alpha
Helix 40
AE4
B
431 439Right-handed alpha
Helix 41
AE5
B
440 442Right-handed 310
Helix 42
AE6
B
443 455Right-handed alpha
Helix 43
AE7
B
459 485Right-handed alpha
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There are 5 sheets in PDB entry 5MHK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 308first strand
Strand 2
D
395 396anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 328first strand
Strand 2
A
335 337anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
326 328first strand
Strand 2
C
335 337anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
326 328first strand
Strand 2
D
335 337anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
326 328first strand
Strand 2
B
335 337anti-parallel
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