Analysis of interatomic Contacts of Structural Units in PDB entry:
5MLA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MLA entry

There are 2 chains in PDB entry 5MLA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 164
B
 GLY 19PHE 160
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5MLA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 26Right-handed alpha
Helix 2
AA2
A
61 66Right-handed 310
Helix 3
AA3
A
67 75Right-handed alpha
Helix 4
AA4
A
86 92Right-handed alpha
Helix 5
AA5
A
92 105Right-handed alpha
Helix 6
AA6
A
126 138Right-handed alpha
Helix 7
AA7
A
151 164Right-handed alpha
Helix 8
AA8
B
20 34Right-handed alpha
Helix 9
AA9
B
36 46Right-handed alpha
Helix 10
AB1
B
59 68Right-handed alpha
Helix 11
AB2
B
69 79Right-handed alpha
Helix 12
AB3
B
92 100Right-handed alpha
Helix 13
AB4
B
102 112Right-handed alpha
Helix 14
AB5
B
125 133Right-handed alpha
Helix 15
AB6
B
135 145Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5MLA.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 46first strand
Strand 2
A
49 58anti-parallel
Strand 3
A
2 10parallel
Strand 4
A
77 83parallel
Strand 5
A
111 116parallel
Strand 6
A
141 143parallel
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