Analysis of interatomic Contacts of Structural Units in PDB entry:
5MLQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MLQ entry

There are 2 chains in PDB entry 5MLQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4LYS 229
B
 THR 4LYS 229
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5MLQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 22Right-handed 310
Helix 2
AA2
A
37 40Right-handed 310
Helix 3
AA3
A
41 56Right-handed alpha
Helix 4
AA4
A
66 72Right-handed 310
Helix 5
AA5
A
77 101Right-handed alpha
Helix 6
AA6
A
112 117Right-handed alpha
Helix 7
AA7
A
120 135Right-handed alpha
Helix 8
AA8
A
135 157Right-handed alpha
Helix 9
AA9
A
161 181Right-handed alpha
Helix 10
AB1
A
181 187Right-handed alpha
Helix 11
AB2
A
199 210Right-handed alpha
Helix 12
AB3
B
18 22Right-handed 310
Helix 13
AB4
B
37 40Right-handed 310
Helix 14
AB5
B
41 56Right-handed alpha
Helix 15
AB6
B
66 72Right-handed 310
Helix 16
AB7
B
77 101Right-handed alpha
Helix 17
AB8
B
112 117Right-handed alpha
Helix 18
AB9
B
120 135Right-handed alpha
Helix 19
AC1
B
135 155Right-handed alpha
Helix 20
AC2
B
161 181Right-handed alpha
Helix 21
AC3
B
181 187Right-handed alpha
Helix 22
AC4
B
199 210Right-handed alpha
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There are 2 sheets in PDB entry 5MLQ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 15first strand
Strand 2
A
219 227anti-parallel
Strand 3
A
191 194parallel
Strand 4
A
28 34parallel
Strand 5
A
59 65parallel
Strand 6
A
107 111parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 15first strand
Strand 2
B
219 227anti-parallel
Strand 3
B
191 194parallel
Strand 4
B
28 33parallel
Strand 5
B
59 64parallel
Strand 6
B
107 111parallel
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