Analysis of interatomic Contacts of Structural Units in PDB entry:
5MLT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MLT entry

There is 1 chain in PDB entry 5MLT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 37LYS 490
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5MLT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
54 71Right-handed alpha
Helix 2
AA2
A
83 94Right-handed alpha
Helix 3
AA3
A
105 112Right-handed alpha
Helix 4
AA4
A
120 124Right-handed 310
Helix 5
AA5
A
126 132Right-handed alpha
Helix 6
AA6
A
134 141Right-handed alpha
Helix 7
AA7
A
166 173Right-handed alpha
Helix 8
AA8
A
181 196Right-handed alpha
Helix 9
AA9
A
241 257Right-handed alpha
Helix 10
AB1
A
286 290Right-handed 310
Helix 11
AB2
A
292 300Right-handed alpha
Helix 12
AB3
A
314 320Right-handed alpha
Helix 13
AB4
A
331 343Right-handed alpha
Helix 14
AB5
A
345 354Right-handed alpha
Helix 15
AB6
A
384 388Right-handed 310
Helix 16
AB7
A
390 394Right-handed 310
Helix 17
AB8
A
401 415Right-handed alpha
Helix 18
AB9
A
427 429Right-handed 310
Helix 19
AC1
A
430 450Right-handed alpha
Helix 20
AC2
A
454 468Right-handed alpha
Helix 21
AC3
A
470 488Right-handed alpha
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There are 5 sheets in PDB entry 5MLT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 78first strand
Strand 2
A
42 47parallel
Strand 3
A
100 102parallel
Strand 4
A
322 325anti-parallel
Strand 5
A
150 151anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 143first strand
Strand 2
A
146 147anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 202first strand
Strand 2
A
278 285parallel
Strand 3
A
159 165anti-parallel
Strand 4
A
303 307anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 215first strand
Strand 2
A
224 227anti-parallel
Strand 3
A
235 237anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 371first strand
Strand 2
A
396 397parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il