Analysis of interatomic Contacts of Structural Units in PDB entry:
5MM7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MM7 entry

There are 3 chains in PDB entry 5MM7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
K
 ASN 61THR 457
A
 ARG 2SER 439
B
 ARG 2ASP 437
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 5MM7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
K
90 95Right-handed alpha
Helix 2
AA2
K
153 161Right-handed alpha
Helix 3
AA3
K
161 167Right-handed alpha
Helix 4
AA4
K
186 192Right-handed alpha
Helix 5
AA5
K
207 217Right-handed alpha
Helix 6
AA6
K
218 223Right-handed alpha
Helix 7
AA7
K
294 297Right-handed 310
Helix 8
AA8
K
298 308Right-handed alpha
Helix 9
AA9
K
358 363Right-handed alpha
Helix 10
AB1
K
365 392Right-handed alpha
Helix 11
AB2
K
401 407Right-handed alpha
Helix 12
AB3
K
426 428Right-handed 310
Helix 13
AB4
K
429 442Right-handed alpha
Helix 14
AB5
A
10 27Right-handed alpha
Helix 15
AB6
A
72 79Right-handed alpha
Helix 16
AB7
A
102 108Right-handed alpha
Helix 17
AB8
A
110 126Right-handed alpha
Helix 18
AB9
A
143 161Right-handed alpha
Helix 19
AC1
A
182 198Right-handed alpha
Helix 20
AC2
A
205 216Right-handed alpha
Helix 21
AC3
A
225 239Right-handed alpha
Helix 22
AC4
A
239 244Right-handed alpha
Helix 23
AC5
A
251 256Right-handed 310
Helix 24
AC6
A
277 282Right-handed 310
Helix 25
AC7
A
287 295Right-handed alpha
Helix 26
AC8
A
296 301Right-handed 310
Helix 27
AC9
A
306 310Right-handed 310
Helix 28
AD1
A
324 338Right-handed alpha
Helix 29
AD2
A
382 402Right-handed alpha
Helix 30
AD3
A
405 410Right-handed alpha
Helix 31
AD4
A
415 433Right-handed alpha
Helix 32
AD5
A
434 436Right-handed 310
Helix 33
AD6
B
12 29Right-handed alpha
Helix 34
AD7
B
40 48Right-handed alpha
Helix 35
AD8
B
49 52Right-handed 310
Helix 36
AD9
B
71 81Right-handed alpha
Helix 37
AE1
B
102 107Right-handed alpha
Helix 38
AE2
B
110 114Right-handed 310
Helix 39
AE3
B
115 127Right-handed alpha
Helix 40
AE4
B
143 161Right-handed alpha
Helix 41
AE5
B
182 198Right-handed alpha
Helix 42
AE6
B
206 215Right-handed alpha
Helix 43
AE7
B
223 237Right-handed alpha
Helix 44
AE8
B
239 244Right-handed alpha
Helix 45
AE9
B
251 259Right-handed alpha
Helix 46
AF1
B
278 284Right-handed 310
Helix 47
AF2
B
287 297Right-handed alpha
Helix 48
AF3
B
324 339Right-handed alpha
Helix 49
AF4
B
340 343Right-handed 310
Helix 50
AF5
B
385 401Right-handed alpha
Helix 51
AF6
B
414 430Right-handed alpha
Helix 52
AF7
B
431 437Right-handed alpha
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There are 5 sheets in PDB entry 5MM7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
146 148first strand
Strand 2
K
79 83parallel
Strand 3
K
418 421parallel
Strand 4
K
174 180parallel
Strand 5
K
341 352parallel
Strand 6
K
323 335anti-parallel
Strand 7
K
229 236anti-parallel
Strand 8
K
242 243anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 68first strand
Strand 2
A
3 9parallel
Strand 3
A
132 140parallel
Strand 4
A
166 171parallel
Strand 5
A
200 201parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
62 63anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 270first strand
Strand 2
A
373 379anti-parallel
Strand 3
A
315 321anti-parallel
Strand 4
A
353 355parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 94first strand
Strand 2
B
65 69parallel
Strand 3
B
3 8parallel
Strand 4
B
132 139parallel
Strand 5
B
166 172parallel
Strand 6
B
201 205parallel
Strand 7
B
267 272parallel
Strand 8
B
374 381anti-parallel
Strand 9
B
312 320anti-parallel
Strand 10
B
351 356parallel
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