Analysis of interatomic Contacts of Structural Units in PDB entry:
5MN7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MN7 entry

There are 2 chains in PDB entry 5MN7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 13PHE 315
B
 THR 13PHE 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 5MN7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 33Right-handed alpha
Helix 2
AA2
A
46 53Right-handed alpha
Helix 3
AA3
A
62 67Right-handed alpha
Helix 4
AA4
A
74 85Right-handed alpha
Helix 5
AA5
A
85 94Right-handed alpha
Helix 6
AA6
A
108 124Right-handed alpha
Helix 7
AA7
A
136 139Right-handed 310
Helix 8
AA8
A
140 156Right-handed alpha
Helix 9
AA9
A
168 176Right-handed alpha
Helix 10
AB1
A
178 199Right-handed alpha
Helix 11
AB2
A
211 219Right-handed alpha
Helix 12
AB3
A
235 246Right-handed alpha
Helix 13
AB4
A
271 286Right-handed alpha
Helix 14
AB5
B
20 33Right-handed alpha
Helix 15
AB6
B
46 53Right-handed alpha
Helix 16
AB7
B
62 67Right-handed alpha
Helix 17
AB8
B
74 85Right-handed alpha
Helix 18
AB9
B
85 94Right-handed alpha
Helix 19
AC1
B
108 124Right-handed alpha
Helix 20
AC2
B
136 139Right-handed 310
Helix 21
AC3
B
140 156Right-handed alpha
Helix 22
AC4
B
168 176Right-handed alpha
Helix 23
AC5
B
178 202Right-handed alpha
Helix 24
AC6
B
210 219Right-handed alpha
Helix 25
AC7
B
235 246Right-handed alpha
Helix 26
AC8
B
271 286Right-handed alpha
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There are 4 sheets in PDB entry 5MN7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 60first strand
Strand 2
A
39 44parallel
Strand 3
A
14 19parallel
Strand 4
A
98 104parallel
Strand 5
A
127 134parallel
Strand 6
A
160 165parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 231first strand
Strand 2
A
306 314anti-parallel
Strand 3
A
257 266anti-parallel
Strand 4
A
291 298parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 60first strand
Strand 2
B
39 44parallel
Strand 3
B
14 19parallel
Strand 4
B
98 104parallel
Strand 5
B
127 134parallel
Strand 6
B
160 165parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
225 231first strand
Strand 2
B
306 314anti-parallel
Strand 3
B
257 266anti-parallel
Strand 4
B
291 298parallel
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