Analysis of interatomic Contacts of Structural Units in PDB entry:
5MQI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MQI entry

There is 1 chain in PDB entry 5MQI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 7ASP 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 5MQI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 16Right-handed alpha
Helix 2
AA2
A
30 44Right-handed alpha
Helix 3
AA3
A
49 59Right-handed alpha
Helix 4
AA4
A
59 64Right-handed alpha
Helix 5
AA5
A
64 72Right-handed alpha
Helix 6
AA6
A
75 90Right-handed alpha
Helix 7
AA7
A
92 98Right-handed alpha
Helix 8
AA8
A
105 124Right-handed alpha
Helix 9
AA9
A
126 143Right-handed alpha
Helix 10
AB1
A
144 148Right-handed 310
Helix 11
AB2
A
149 169Right-handed alpha
Helix 12
AB3
A
184 196Right-handed alpha
Helix 13
AB4
A
197 208Right-handed alpha
Helix 14
AB5
A
209 213Right-handed 310
Helix 15
AB6
A
214 226Right-handed alpha
Helix 16
AB7
A
230 235Right-handed alpha
Helix 17
AB8
A
335 353Right-handed alpha
Helix 18
AB9
A
353 368Right-handed alpha
Helix 19
AC1
A
369 372Right-handed 310
Helix 20
AC2
A
375 392Right-handed alpha
Helix 21
AC3
A
395 403Right-handed 310
Helix 22
AC4
A
404 425Right-handed alpha
Helix 23
AC5
A
428 452Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5MQI.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 21first strand
Strand 2
A
24 27anti-parallel
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