Analysis of interatomic Contacts of Structural Units in PDB entry:
5MR0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5MR0 entry

There are 7 chains in PDB entry 5MR0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLU 290
B	MET 1	GLU 290
C	MET 1	GLU 290
D	MET 1	GLU 290
E	MET 1	GLU 290
F	MET 1	ILE 149
F	SER 151	GLU 290

There are 53 helices in PDB entry 5MR0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	22	27	Right-handed alpha
Helix 2	AA2	A	44	59	Right-handed alpha
Helix 3	AA3	A	66	81	Right-handed alpha
Helix 4	AA4	A	102	106	Right-handed 310
Helix 5	AA5	A	124	129	Right-handed alpha
Helix 6	AA6	A	154	167	Right-handed alpha
Helix 7	AA7	A	208	221	Right-handed alpha
Helix 8	AA8	A	231	237	Right-handed alpha
Helix 9	AA9	A	267	284	Right-handed alpha
Helix 10	AB1	B	22	27	Right-handed alpha
Helix 11	AB2	B	44	59	Right-handed alpha
Helix 12	AB3	B	66	81	Right-handed alpha
Helix 13	AB4	B	102	106	Right-handed 310
Helix 14	AB5	B	125	129	Right-handed alpha
Helix 15	AB6	B	154	167	Right-handed alpha
Helix 16	AB7	B	208	221	Right-handed alpha
Helix 17	AB8	B	231	237	Right-handed alpha
Helix 18	AB9	B	267	284	Right-handed alpha
Helix 19	AC1	C	22	27	Right-handed alpha
Helix 20	AC2	C	44	59	Right-handed alpha
Helix 21	AC3	C	66	81	Right-handed alpha
Helix 22	AC4	C	102	106	Right-handed 310
Helix 23	AC5	C	125	129	Right-handed alpha
Helix 24	AC6	C	154	167	Right-handed alpha
Helix 25	AC7	C	208	221	Right-handed alpha
Helix 26	AC8	C	231	237	Right-handed alpha
Helix 27	AC9	C	267	284	Right-handed alpha
Helix 28	AD1	D	22	27	Right-handed alpha
Helix 29	AD2	D	44	59	Right-handed alpha
Helix 30	AD3	D	66	81	Right-handed alpha
Helix 31	AD4	D	102	106	Right-handed 310
Helix 32	AD5	D	154	167	Right-handed alpha
Helix 33	AD6	D	208	221	Right-handed alpha
Helix 34	AD7	D	231	237	Right-handed alpha
Helix 35	AD8	D	267	284	Right-handed alpha
Helix 36	AD9	E	22	27	Right-handed alpha
Helix 37	AE1	E	44	59	Right-handed alpha
Helix 38	AE2	E	66	81	Right-handed alpha
Helix 39	AE3	E	102	106	Right-handed 310
Helix 40	AE4	E	124	129	Right-handed alpha
Helix 41	AE5	E	154	167	Right-handed alpha
Helix 42	AE6	E	208	221	Right-handed alpha
Helix 43	AE7	E	231	237	Right-handed alpha
Helix 44	AE8	E	267	284	Right-handed alpha
Helix 45	AE9	F	22	27	Right-handed alpha
Helix 46	AF1	F	44	59	Right-handed alpha
Helix 47	AF2	F	66	81	Right-handed alpha
Helix 48	AF3	F	102	106	Right-handed 310
Helix 49	AF4	F	124	129	Right-handed alpha
Helix 50	AF5	F	154	167	Right-handed alpha
Helix 51	AF6	F	208	221	Right-handed alpha
Helix 52	AF7	F	231	237	Right-handed alpha
Helix 53	AF8	F	267	284	Right-handed alpha

There are 27 sheets in PDB entry 5MR0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	12	first strand
Strand 2	A	3	6	anti-parallel
Strand 3	A	111	117	anti-parallel
Strand 4	A	86	93	anti-parallel
Strand 5	A	30	32	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	12	first strand
Strand 2	A	3	6	anti-parallel
Strand 3	A	111	117	anti-parallel
Strand 4	A	86	93	anti-parallel
Strand 5	A	35	38	anti-parallel
Strand 6	A	41	42	anti-parallel
Strand 7	A	286	287	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	19	first strand
Strand 2	B	17	19	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	184	first strand
Strand 2	A	171	175	anti-parallel
Strand 3	A	130	134	parallel
Strand 4	A	249	256	parallel
Strand 5	A	240	245	anti-parallel
Strand 6	A	188	193	anti-parallel
Strand 7	A	196	199	anti-parallel
Strand 8	A	225	227	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	184	first strand
Strand 2	A	171	175	anti-parallel
Strand 3	A	130	134	parallel
Strand 4	A	249	256	parallel
Strand 5	A	259	260	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	12	first strand
Strand 2	B	3	6	anti-parallel
Strand 3	B	111	117	anti-parallel
Strand 4	B	86	93	anti-parallel
Strand 5	B	30	32	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	12	first strand
Strand 2	B	3	6	anti-parallel
Strand 3	B	111	117	anti-parallel
Strand 4	B	86	93	anti-parallel
Strand 5	B	35	38	anti-parallel
Strand 6	B	41	42	anti-parallel
Strand 7	B	286	287	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	184	first strand
Strand 2	B	171	175	anti-parallel
Strand 3	B	130	134	parallel
Strand 4	B	249	256	parallel
Strand 5	B	240	245	anti-parallel
Strand 6	B	188	193	anti-parallel
Strand 7	B	196	199	anti-parallel
Strand 8	B	225	227	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	184	first strand
Strand 2	B	171	175	anti-parallel
Strand 3	B	130	134	parallel
Strand 4	B	249	256	parallel
Strand 5	B	259	260	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	9	12	first strand
Strand 2	C	3	6	anti-parallel
Strand 3	C	111	117	anti-parallel
Strand 4	C	86	93	anti-parallel
Strand 5	C	30	32	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	9	12	first strand
Strand 2	C	3	6	anti-parallel
Strand 3	C	111	117	anti-parallel
Strand 4	C	86	93	anti-parallel
Strand 5	C	35	38	anti-parallel
Strand 6	C	41	42	anti-parallel
Strand 7	C	286	287	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	17	19	first strand
Strand 2	D	17	19	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	184	first strand
Strand 2	C	171	175	anti-parallel
Strand 3	C	130	134	parallel
Strand 4	C	249	256	parallel
Strand 5	C	240	245	anti-parallel
Strand 6	C	188	193	anti-parallel
Strand 7	C	196	199	anti-parallel
Strand 8	C	225	227	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	184	first strand
Strand 2	C	171	175	anti-parallel
Strand 3	C	130	134	parallel
Strand 4	C	249	256	parallel
Strand 5	C	259	260	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	12	first strand
Strand 2	D	3	6	anti-parallel
Strand 3	D	111	117	anti-parallel
Strand 4	D	86	93	anti-parallel
Strand 5	D	30	32	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	12	first strand
Strand 2	D	3	6	anti-parallel
Strand 3	D	111	117	anti-parallel
Strand 4	D	86	93	anti-parallel
Strand 5	D	35	38	anti-parallel
Strand 6	D	41	42	anti-parallel
Strand 7	D	286	287	anti-parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	181	184	first strand
Strand 2	D	171	175	anti-parallel
Strand 3	D	130	134	parallel
Strand 4	D	249	256	parallel
Strand 5	D	240	245	anti-parallel
Strand 6	D	188	193	anti-parallel
Strand 7	D	196	199	anti-parallel
Strand 8	D	225	227	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	181	184	first strand
Strand 2	D	171	175	anti-parallel
Strand 3	D	130	134	parallel
Strand 4	D	249	256	parallel
Strand 5	D	259	260	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	12	first strand
Strand 2	E	3	6	anti-parallel
Strand 3	E	111	117	anti-parallel
Strand 4	E	86	93	anti-parallel
Strand 5	E	30	32	anti-parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	12	first strand
Strand 2	E	3	6	anti-parallel
Strand 3	E	111	117	anti-parallel
Strand 4	E	86	93	anti-parallel
Strand 5	E	35	38	anti-parallel
Strand 6	E	41	42	anti-parallel
Strand 7	E	286	287	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	17	19	first strand
Strand 2	F	17	19	anti-parallel

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There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	181	184	first strand
Strand 2	E	171	175	anti-parallel
Strand 3	E	130	134	parallel
Strand 4	E	249	256	parallel
Strand 5	E	240	245	anti-parallel
Strand 6	E	188	193	anti-parallel
Strand 7	E	196	199	anti-parallel
Strand 8	E	225	227	parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	181	184	first strand
Strand 2	E	171	175	anti-parallel
Strand 3	E	130	134	parallel
Strand 4	E	249	256	parallel
Strand 5	E	259	260	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	9	12	first strand
Strand 2	F	3	6	anti-parallel
Strand 3	F	111	117	anti-parallel
Strand 4	F	86	93	anti-parallel
Strand 5	F	30	32	anti-parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	9	12	first strand
Strand 2	F	3	6	anti-parallel
Strand 3	F	111	117	anti-parallel
Strand 4	F	86	93	anti-parallel
Strand 5	F	35	38	anti-parallel
Strand 6	F	41	42	anti-parallel
Strand 7	F	286	287	anti-parallel

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There are 8 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	181	184	first strand
Strand 2	F	171	175	anti-parallel
Strand 3	F	130	134	parallel
Strand 4	F	249	256	parallel
Strand 5	F	240	245	anti-parallel
Strand 6	F	188	193	anti-parallel
Strand 7	F	196	199	anti-parallel
Strand 8	F	225	227	parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	181	184	first strand
Strand 2	F	171	175	anti-parallel
Strand 3	F	130	134	parallel
Strand 4	F	249	256	parallel
Strand 5	F	259	260	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5MR0

Analysis of interatomic Contacts of Structural Units in PDB entry:
5MR0