Analysis of interatomic Contacts of Structural Units in PDB entry:
5MR2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5MR2 entry

There are 3 chains in PDB entry 5MR2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 174	LYS 284
B	GLU 173	LYS 284
C	THR 174	LYS 284

There is 1 helix in PDB entry 5MR2. Click on helix number for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	220	222	Right-handed 310

There are 9 sheets in PDB entry 5MR2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	176	181	first strand
Strand 2	A	190	196	anti-parallel
Strand 3	A	224	230	anti-parallel
Strand 4	A	243	244	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	214	217	first strand
Strand 2	A	204	211	anti-parallel
Strand 3	A	257	268	anti-parallel
Strand 4	A	246	250	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	214	217	first strand
Strand 2	A	204	211	anti-parallel
Strand 3	A	257	268	anti-parallel
Strand 4	A	274	283	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	176	181	first strand
Strand 2	B	190	196	anti-parallel
Strand 3	B	224	229	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	214	217	first strand
Strand 2	B	204	211	anti-parallel
Strand 3	B	257	268	anti-parallel
Strand 4	B	246	250	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	214	217	first strand
Strand 2	B	204	211	anti-parallel
Strand 3	B	257	268	anti-parallel
Strand 4	B	274	283	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	176	181	first strand
Strand 2	C	190	196	anti-parallel
Strand 3	C	224	229	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	214	217	first strand
Strand 2	C	204	211	anti-parallel
Strand 3	C	257	268	anti-parallel
Strand 4	C	246	249	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	214	217	first strand
Strand 2	C	204	211	anti-parallel
Strand 3	C	257	268	anti-parallel
Strand 4	C	274	283	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5MR2

Analysis of interatomic Contacts of Structural Units in PDB entry:
5MR2