Analysis of interatomic Contacts of Structural Units in PDB entry:
5MR5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MR5 entry

There are 4 chains in PDB entry 5MR5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 100VAL 197
B
 ALA 100VAL 197
C
 ASN 159GLY 356
D
 ASN 159GLY 356
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 5MR5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
113 115Right-handed 310
Helix 2
AA2
A
139 151Right-handed alpha
Helix 3
AA3
B
113 116Right-handed 310
Helix 4
AA4
B
139 151Right-handed alpha
Helix 5
AA5
C
160 170Right-handed alpha
Helix 6
AA6
C
171 187Right-handed alpha
Helix 7
AA7
C
196 211Right-handed alpha
Helix 8
AA8
C
212 221Right-handed alpha
Helix 9
AA9
C
226 236Right-handed alpha
Helix 10
AB1
C
238 243Right-handed alpha
Helix 11
AB2
C
250 261Right-handed alpha
Helix 12
AB3
C
261 276Right-handed alpha
Helix 13
AB4
C
285 288Right-handed 310
Helix 14
AB5
C
289 299Right-handed alpha
Helix 15
AB6
C
328 330Right-handed 310
Helix 16
AB7
C
331 344Right-handed alpha
Helix 17
AB8
C
345 356Right-handed alpha
Helix 18
AB9
D
160 170Right-handed alpha
Helix 19
AC1
D
171 187Right-handed alpha
Helix 20
AC2
D
196 211Right-handed alpha
Helix 21
AC3
D
212 221Right-handed alpha
Helix 22
AC4
D
226 236Right-handed alpha
Helix 23
AC5
D
238 243Right-handed alpha
Helix 24
AC6
D
250 260Right-handed alpha
Helix 25
AC7
D
261 275Right-handed alpha
Helix 26
AC8
D
285 288Right-handed 310
Helix 27
AC9
D
289 299Right-handed alpha
Helix 28
AD1
D
328 330Right-handed 310
Helix 29
AD2
D
331 344Right-handed alpha
Helix 30
AD3
D
345 356Right-handed alpha
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There are 8 sheets in PDB entry 5MR5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 111first strand
Strand 2
A
124 131anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 170first strand
Strand 2
A
191 196anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 177first strand
Strand 2
A
183 186anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
104 111first strand
Strand 2
B
124 131anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 170first strand
Strand 2
B
191 196anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 177first strand
Strand 2
B
183 186anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
307 309first strand
Strand 2
C
319 321anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
307 309first strand
Strand 2
D
319 321anti-parallel
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