Analysis of interatomic Contacts of Structural Units in PDB entry:
5MRJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MRJ entry

There are 2 chains in PDB entry 5MRJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 90LEU 396
B
 GLY 92LEU 396
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 5MRJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
95 103Right-handed alpha
Helix 2
AA2
A
113 117Right-handed 310
Helix 3
AA3
A
119 130Right-handed alpha
Helix 4
AA4
A
140 145Right-handed alpha
Helix 5
AA5
A
153 166Right-handed alpha
Helix 6
AA6
A
182 188Right-handed alpha
Helix 7
AA7
A
190 209Right-handed alpha
Helix 8
AA8
A
232 239Right-handed alpha
Helix 9
AA9
A
240 254Right-handed alpha
Helix 10
AB1
A
271 276Right-handed alpha
Helix 11
AB2
A
277 288Right-handed alpha
Helix 12
AB3
A
312 322Right-handed alpha
Helix 13
AB4
A
339 352Right-handed alpha
Helix 14
AB5
A
365 369Right-handed 310
Helix 15
AB6
A
371 375Right-handed 310
Helix 16
AB7
A
386 396Right-handed alpha
Helix 17
AB8
B
95 102Right-handed alpha
Helix 18
AB9
B
113 117Right-handed 310
Helix 19
AC1
B
119 130Right-handed alpha
Helix 20
AC2
B
140 145Right-handed alpha
Helix 21
AC3
B
153 166Right-handed alpha
Helix 22
AC4
B
182 187Right-handed alpha
Helix 23
AC5
B
190 209Right-handed alpha
Helix 24
AC6
B
232 239Right-handed alpha
Helix 25
AC7
B
240 254Right-handed alpha
Helix 26
AC8
B
277 288Right-handed alpha
Helix 27
AC9
B
309 311Right-handed 310
Helix 28
AD1
B
312 322Right-handed alpha
Helix 29
AD2
B
339 352Right-handed alpha
Helix 30
AD3
B
365 369Right-handed 310
Helix 31
AD4
B
386 395Right-handed alpha
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There are 2 sheets in PDB entry 5MRJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 301first strand
Strand 2
A
327 335parallel
Strand 3
A
356 361parallel
Strand 4
A
107 112parallel
Strand 5
A
132 135parallel
Strand 6
A
169 172parallel
Strand 7
A
215 220parallel
Strand 8
A
258 263parallel
Strand 9
A
294 297parallel
Strand 10
A
327 335parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
300 301first strand
Strand 2
B
327 335parallel
Strand 3
B
356 361parallel
Strand 4
B
107 112parallel
Strand 5
B
132 135parallel
Strand 6
B
169 176parallel
Strand 7
B
215 220parallel
Strand 8
B
258 263parallel
Strand 9
B
294 297parallel
Strand 10
B
327 335parallel
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