Analysis of interatomic Contacts of Structural Units in PDB entry:
5MSO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MSO entry

There is 1 chain in PDB entry 5MSO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 732LEU 1174
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 5MSO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
734 740Right-handed alpha
Helix 2
AA2
A
752 754Right-handed 310
Helix 3
AA3
A
755 759Right-handed 310
Helix 4
AA4
A
761 768Right-handed alpha
Helix 5
AA5
A
769 771Right-handed 310
Helix 6
AA6
A
788 805Right-handed alpha
Helix 7
AA7
A
817 829Right-handed alpha
Helix 8
AA8
A
833 847Right-handed alpha
Helix 9
AA9
A
857 862Right-handed 310
Helix 10
AB1
A
863 874Right-handed alpha
Helix 11
AB2
A
889 898Right-handed alpha
Helix 12
AB3
A
898 909Right-handed alpha
Helix 13
AB4
A
923 928Right-handed 310
Helix 14
AB5
A
929 933Right-handed 310
Helix 15
AB6
A
938 943Right-handed alpha
Helix 16
AB7
A
953 975Right-handed alpha
Helix 17
AB8
A
1000 1013Right-handed alpha
Helix 18
AB9
A
1038 1049Right-handed alpha
Helix 19
AC1
A
1050 1053Right-handed 310
Helix 20
AC2
A
1070 1081Right-handed alpha
Helix 21
AC3
A
1090 1104Right-handed alpha
Helix 22
AC4
A
1106 1112Right-handed alpha
Helix 23
AC5
A
1114 1122Right-handed 310
Helix 24
AC6
A
1135 1145Right-handed alpha
Helix 25
AC7
A
1157 1171Right-handed alpha
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There are 4 sheets in PDB entry 5MSO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
748 750first strand
Strand 2
A
945 947anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
848 852first strand
Strand 2
A
808 813parallel
Strand 3
A
780 784parallel
Strand 4
A
876 879parallel
Strand 5
A
916 921parallel
Strand 6
A
978 983parallel
Strand 7
A
1056 1060parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
986 987first strand
Strand 2
A
1036 1037parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1014 1016first strand
Strand 2
A
1086 1088parallel
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