Analysis of interatomic Contacts of Structural Units in PDB entry:
5MU7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MU7 entry

There are 2 chains in PDB entry 5MU7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 20PHE 390
B
VAL 2LYS 151
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 5MU7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
20 32Right-handed alpha
Helix 2
AA2
A
33 51Right-handed alpha
Helix 3
AA3
A
54 56Right-handed 310
Helix 4
AA4
A
57 65Right-handed alpha
Helix 5
AA5
A
70 84Right-handed alpha
Helix 6
AA6
A
95 108Right-handed alpha
Helix 7
AA7
A
112 124Right-handed alpha
Helix 8
AA8
A
128 133Right-handed alpha
Helix 9
AA9
A
135 143Right-handed alpha
Helix 10
AB1
A
147 165Right-handed alpha
Helix 11
AB2
A
166 169Right-handed 310
Helix 12
AB3
A
171 183Right-handed alpha
Helix 13
AB4
A
185 200Right-handed alpha
Helix 14
AB5
A
200 211Right-handed alpha
Helix 15
AB6
A
212 218Right-handed 310
Helix 16
AB7
A
219 237Right-handed alpha
Helix 17
AB8
A
240 252Right-handed alpha
Helix 18
AB9
A
256 271Right-handed alpha
Helix 19
AC1
A
273 291Right-handed alpha
Helix 20
AC2
A
293 311Right-handed alpha
Helix 21
AC3
A
315 317Right-handed 310
Helix 22
AC4
A
318 325Right-handed alpha
Helix 23
AC5
A
326 328Right-handed 310
Helix 24
AC6
A
330 343Right-handed alpha
Helix 25
AC7
A
349 367Right-handed alpha
Helix 26
AC8
A
372 389Right-handed alpha
Helix 27
AC9
B
25 42Right-handed alpha
Helix 28
AD1
B
75 94Right-handed alpha
Helix 29
AD2
B
98 105Right-handed alpha
Helix 30
AD3
B
105 116Right-handed alpha
Helix 31
AD4
B
126 136Right-handed alpha
Helix 32
AD5
B
138 151Right-handed alpha
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There are 2 sheets in PDB entry 5MU7. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
15 20first strand
Strand 2
B
3 10anti-parallel
Strand 3
B
64 71anti-parallel
Strand 4
B
54 61anti-parallel
Strand 5
B
48 51anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
117 118first strand
Strand 2
B
121 122anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il