Analysis of interatomic Contacts of Structural Units in PDB entry:
5MUF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MUF entry

There are 3 chains in PDB entry 5MUF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 56SER 289
B
 GLY 56SER 289
C
 GLY 56SER 289
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5MUF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
114 118Right-handed 310
Helix 2
AA2
A
121 138Right-handed alpha
Helix 3
AA3
A
150 164Right-handed alpha
Helix 4
AA4
A
193 212Right-handed alpha
Helix 5
AA5
A
230 242Right-handed alpha
Helix 6
AA6
A
245 252Right-handed 310
Helix 7
AA7
A
282 286Right-handed 310
Helix 8
AA8
B
114 118Right-handed 310
Helix 9
AA9
B
121 138Right-handed alpha
Helix 10
AB1
B
150 164Right-handed alpha
Helix 11
AB2
B
193 212Right-handed alpha
Helix 12
AB3
B
230 242Right-handed alpha
Helix 13
AB4
B
245 252Right-handed 310
Helix 14
AB5
B
282 286Right-handed 310
Helix 15
AB6
C
114 118Right-handed 310
Helix 16
AB7
C
121 138Right-handed alpha
Helix 17
AB8
C
150 164Right-handed alpha
Helix 18
AB9
C
193 212Right-handed alpha
Helix 19
AC1
C
230 242Right-handed alpha
Helix 20
AC2
C
245 252Right-handed 310
Helix 21
AC3
C
282 286Right-handed 310
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There are 3 sheets in PDB entry 5MUF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 172first strand
Strand 2
A
144 148parallel
Strand 3
A
223 229parallel
Strand 4
A
98 104parallel
Strand 5
A
259 264anti-parallel
Strand 6
A
270 277anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
168 172first strand
Strand 2
B
144 148parallel
Strand 3
B
223 229parallel
Strand 4
B
98 104parallel
Strand 5
B
259 264anti-parallel
Strand 6
B
270 277anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
168 172first strand
Strand 2
C
144 148parallel
Strand 3
C
223 229parallel
Strand 4
C
98 104parallel
Strand 5
C
259 264anti-parallel
Strand 6
C
270 277anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il