Analysis of interatomic Contacts of Structural Units in PDB entry:
5MUM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MUM entry

There is 1 chain in PDB entry 5MUM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 26VAL 430
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 5MUM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
155 157Right-handed 310
Helix 2
AA2
A
224 226Right-handed 310
Helix 3
AA3
A
354 358Right-handed 310
Helix 4
AA4
A
392 400Right-handed alpha
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There are 7 sheets in PDB entry 5MUM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 34first strand
Strand 2
A
423 429anti-parallel
Strand 3
A
403 407anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 53first strand
Strand 2
A
56 62anti-parallel
Strand 3
A
67 74anti-parallel
Strand 4
A
81 88anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 102first strand
Strand 2
A
108 112anti-parallel
Strand 3
A
121 123anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 153first strand
Strand 2
A
159 165anti-parallel
Strand 3
A
172 179anti-parallel
Strand 4
A
184 189anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 207first strand
Strand 2
A
213 220anti-parallel
Strand 3
A
228 236anti-parallel
Strand 4
A
261 264anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 280first strand
Strand 2
A
286 292anti-parallel
Strand 3
A
301 307anti-parallel
Strand 4
A
312 316anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
340 344first strand
Strand 2
A
347 352anti-parallel
Strand 3
A
362 366anti-parallel
Strand 4
A
375 378anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il