Analysis of interatomic Contacts of Structural Units in PDB entry:
5MUS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MUS entry

There are 2 chains in PDB entry 5MUS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2GLU 2046
B
 GLY 1GLU 2046
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5MUS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1721 1737Right-handed alpha
Helix 2
AA2
A
1745 1756Right-handed alpha
Helix 3
AA3
A
1761 1768Right-handed alpha
Helix 4
AA4
A
1771 1782Right-handed alpha
Helix 5
AA5
A
1857 1873Right-handed alpha
Helix 6
AA6
A
1876 1881Right-handed alpha
Helix 7
AA7
A
1883 1887Right-handed 310
Helix 8
AA8
A
1924 1941Right-handed alpha
Helix 9
AA9
A
1943 1949Right-handed alpha
Helix 10
AB1
A
1951 1967Right-handed alpha
Helix 11
AB2
A
1970 1978Right-handed alpha
Helix 12
AB3
A
1979 1981Right-handed 310
Helix 13
AB4
A
1982 1993Right-handed alpha
Helix 14
AB5
A
2034 2039Right-handed alpha
Helix 15
AB6
B
1721 1737Right-handed alpha
Helix 16
AB7
B
1745 1756Right-handed alpha
Helix 17
AB8
B
1761 1766Right-handed alpha
Helix 18
AB9
B
1771 1782Right-handed alpha
Helix 19
AC1
B
1857 1874Right-handed alpha
Helix 20
AC2
B
1876 1881Right-handed alpha
Helix 21
AC3
B
1883 1885Right-handed 310
Helix 22
AC4
B
1924 1941Right-handed alpha
Helix 23
AC5
B
1943 1950Right-handed alpha
Helix 24
AC6
B
1951 1967Right-handed alpha
Helix 25
AC7
B
1970 1978Right-handed alpha
Helix 26
AC8
B
1979 1981Right-handed 310
Helix 27
AC9
B
1982 1993Right-handed alpha
Helix 28
AD1
B
2034 2039Right-handed alpha
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There are 5 sheets in PDB entry 5MUS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1742 1743first strand
Strand 2
A
1900 1903anti-parallel
Strand 3
A
1906 1909anti-parallel
Strand 4
A
1916 1917anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1888 1892first strand
Strand 2
A
1843 1853parallel
Strand 3
A
1832 1840anti-parallel
Strand 4
A
1817 1825anti-parallel
Strand 5
A
1798 1807anti-parallel
Strand 6
B
1798 1807parallel
Strand 7
B
1818 1825anti-parallel
Strand 8
B
1832 1840anti-parallel
Strand 9
B
1843 1853anti-parallel
Strand 10
B
1887 1892parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1995 1997first strand
Strand 2
A
2002 2006anti-parallel
Strand 3
A
2010 2014anti-parallel
Strand 4
A
2025 2029anti-parallel
Strand 5
A
2020 2022anti-parallel
Strand 6
B
2042 2043parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2042 2043first strand
Strand 2
B
2020 2022parallel
Strand 3
B
2025 2029anti-parallel
Strand 4
B
2010 2014anti-parallel
Strand 5
B
2002 2006anti-parallel
Strand 6
B
1995 1997anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1742 1743first strand
Strand 2
B
1900 1903anti-parallel
Strand 3
B
1906 1909anti-parallel
Strand 4
B
1916 1917anti-parallel
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