Analysis of interatomic Contacts of Structural Units in PDB entry:
5MUX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5MUX entry

There are 6 chains in PDB entry 5MUX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	MET 469
B	MET 1	MET 472
C	MET 1	MET 472
D	MET 1	CYS 471
E	MET 1	MET 472
F	PRO 2	MET 469

There are175 helices in PDB entry 5MUX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	18	Right-handed alpha
Helix 2	AA2	A	22	44	Right-handed alpha
Helix 3	AA3	A	46	51	Right-handed alpha
Helix 4	AA4	A	76	90	Right-handed alpha
Helix 5	AA5	A	104	107	Right-handed 310
Helix 6	AA6	A	108	126	Right-handed alpha
Helix 7	AA7	A	132	154	Right-handed alpha
Helix 8	AA8	A	156	160	Right-handed 310
Helix 9	AA9	A	163	179	Right-handed alpha
Helix 10	AB1	A	182	196	Right-handed alpha
Helix 11	AB2	A	201	205	Right-handed 310
Helix 12	AB3	A	210	214	Right-handed 310
Helix 13	AB4	A	215	233	Right-handed alpha
Helix 14	AB5	A	248	254	Right-handed alpha
Helix 15	AB6	A	267	272	Right-handed alpha
Helix 16	AB7	A	282	284	Right-handed 310
Helix 17	AB8	A	285	300	Right-handed alpha
Helix 18	AB9	A	314	321	Right-handed alpha
Helix 19	AC1	A	329	335	Right-handed alpha
Helix 20	AC2	A	336	348	Right-handed alpha
Helix 21	AC3	A	351	355	Right-handed 310
Helix 22	AC4	A	356	361	Right-handed alpha
Helix 23	AC5	A	362	370	Right-handed alpha
Helix 24	AC6	A	377	386	Right-handed alpha
Helix 25	AC7	A	417	419	Right-handed 310
Helix 26	AC8	A	420	438	Right-handed alpha
Helix 27	AC9	A	441	454	Right-handed alpha
Helix 28	AD1	A	454	459	Right-handed alpha
Helix 29	AD2	A	462	467	Right-handed alpha
Helix 30	AD3	B	5	18	Right-handed alpha
Helix 31	AD4	B	22	44	Right-handed alpha
Helix 32	AD5	B	46	51	Right-handed alpha
Helix 33	AD6	B	76	90	Right-handed alpha
Helix 34	AD7	B	104	107	Right-handed 310
Helix 35	AD8	B	108	126	Right-handed alpha
Helix 36	AD9	B	132	154	Right-handed alpha
Helix 37	AE1	B	156	160	Right-handed 310
Helix 38	AE2	B	163	179	Right-handed alpha
Helix 39	AE3	B	182	196	Right-handed alpha
Helix 40	AE4	B	201	205	Right-handed 310
Helix 41	AE5	B	210	214	Right-handed 310
Helix 42	AE6	B	215	233	Right-handed alpha
Helix 43	AE7	B	248	254	Right-handed alpha
Helix 44	AE8	B	267	272	Right-handed alpha
Helix 45	AE9	B	282	284	Right-handed 310
Helix 46	AF1	B	285	300	Right-handed alpha
Helix 47	AF2	B	302	304	Right-handed 310
Helix 48	AF3	B	314	321	Right-handed alpha
Helix 49	AF4	B	329	335	Right-handed alpha
Helix 50	AF5	B	336	348	Right-handed alpha
Helix 51	AF6	B	351	355	Right-handed 310
Helix 52	AF7	B	356	361	Right-handed alpha
Helix 53	AF8	B	362	370	Right-handed alpha
Helix 54	AF9	B	377	386	Right-handed alpha
Helix 55	AG1	B	417	419	Right-handed 310
Helix 56	AG2	B	420	440	Right-handed alpha
Helix 57	AG3	B	441	454	Right-handed alpha
Helix 58	AG4	B	454	459	Right-handed alpha
Helix 59	AG5	B	462	469	Right-handed alpha
Helix 60	AG6	C	5	18	Right-handed alpha
Helix 61	AG7	C	22	44	Right-handed alpha
Helix 62	AG8	C	46	51	Right-handed alpha
Helix 63	AG9	C	76	90	Right-handed alpha
Helix 64	AH1	C	104	107	Right-handed 310
Helix 65	AH2	C	108	126	Right-handed alpha
Helix 66	AH3	C	132	154	Right-handed alpha
Helix 67	AH4	C	156	160	Right-handed 310
Helix 68	AH5	C	163	179	Right-handed alpha
Helix 69	AH6	C	182	196	Right-handed alpha
Helix 70	AH7	C	201	205	Right-handed 310
Helix 71	AH8	C	210	214	Right-handed 310
Helix 72	AH9	C	215	233	Right-handed alpha
Helix 73	AI1	C	248	254	Right-handed alpha
Helix 74	AI2	C	267	272	Right-handed alpha
Helix 75	AI3	C	282	284	Right-handed 310
Helix 76	AI4	C	285	300	Right-handed alpha
Helix 77	AI5	C	314	321	Right-handed alpha
Helix 78	AI6	C	329	335	Right-handed alpha
Helix 79	AI7	C	336	348	Right-handed alpha
Helix 80	AI8	C	351	355	Right-handed 310
Helix 81	AI9	C	356	361	Right-handed alpha
Helix 82	AJ1	C	363	370	Right-handed alpha
Helix 83	AJ2	C	377	386	Right-handed alpha
Helix 84	AJ3	C	417	419	Right-handed 310
Helix 85	AJ4	C	420	438	Right-handed alpha
Helix 86	AJ5	C	441	454	Right-handed alpha
Helix 87	AJ6	C	454	459	Right-handed alpha
Helix 88	AJ7	C	462	469	Right-handed alpha
Helix 89	AJ8	D	5	18	Right-handed alpha
Helix 90	AJ9	D	22	44	Right-handed alpha
Helix 91	AK1	D	46	51	Right-handed alpha
Helix 92	AK2	D	76	90	Right-handed alpha
Helix 93	AK3	D	104	107	Right-handed 310
Helix 94	AK4	D	108	126	Right-handed alpha
Helix 95	AK5	D	132	154	Right-handed alpha
Helix 96	AK6	D	156	160	Right-handed 310
Helix 97	AK7	D	163	179	Right-handed alpha
Helix 98	AK8	D	182	196	Right-handed alpha
Helix 99	AK9	D	201	205	Right-handed 310
Helix 100	AL1	D	210	214	Right-handed 310
Helix 101	AL2	D	215	233	Right-handed alpha
Helix 102	AL3	D	248	254	Right-handed alpha
Helix 103	AL4	D	267	272	Right-handed alpha
Helix 104	AL5	D	282	284	Right-handed 310
Helix 105	AL6	D	285	300	Right-handed alpha
Helix 106	AL7	D	302	304	Right-handed 310
Helix 107	AL8	D	314	321	Right-handed alpha
Helix 108	AL9	D	329	335	Right-handed alpha
Helix 109	AM1	D	336	348	Right-handed alpha
Helix 110	AM2	D	351	355	Right-handed 310
Helix 111	AM3	D	356	361	Right-handed alpha
Helix 112	AM4	D	363	370	Right-handed alpha
Helix 113	AM5	D	377	386	Right-handed alpha
Helix 114	AM6	D	417	419	Right-handed 310
Helix 115	AM7	D	420	438	Right-handed alpha
Helix 116	AM8	D	441	454	Right-handed alpha
Helix 117	AM9	D	454	459	Right-handed alpha
Helix 118	AN1	D	462	469	Right-handed alpha
Helix 119	AN2	E	5	18	Right-handed alpha
Helix 120	AN3	E	22	44	Right-handed alpha
Helix 121	AN4	E	46	51	Right-handed alpha
Helix 122	AN5	E	76	90	Right-handed alpha
Helix 123	AN6	E	104	107	Right-handed 310
Helix 124	AN7	E	108	126	Right-handed alpha
Helix 125	AN8	E	132	154	Right-handed alpha
Helix 126	AN9	E	156	160	Right-handed 310
Helix 127	AO1	E	163	179	Right-handed alpha
Helix 128	AO2	E	182	196	Right-handed alpha
Helix 129	AO3	E	201	205	Right-handed 310
Helix 130	AO4	E	210	214	Right-handed 310
Helix 131	AO5	E	215	233	Right-handed alpha
Helix 132	AO6	E	248	254	Right-handed alpha
Helix 133	AO7	E	267	272	Right-handed alpha
Helix 134	AO8	E	282	284	Right-handed 310
Helix 135	AO9	E	285	300	Right-handed alpha
Helix 136	AP1	E	314	321	Right-handed alpha
Helix 137	AP2	E	329	335	Right-handed alpha
Helix 138	AP3	E	336	348	Right-handed alpha
Helix 139	AP4	E	351	355	Right-handed 310
Helix 140	AP5	E	356	361	Right-handed alpha
Helix 141	AP6	E	362	370	Right-handed alpha
Helix 142	AP7	E	377	386	Right-handed alpha
Helix 143	AP8	E	417	419	Right-handed 310
Helix 144	AP9	E	420	438	Right-handed alpha
Helix 145	AQ1	E	441	454	Right-handed alpha
Helix 146	AQ2	E	454	459	Right-handed alpha
Helix 147	AQ3	E	462	469	Right-handed alpha
Helix 148	AQ4	F	5	18	Right-handed alpha
Helix 149	AQ5	F	22	44	Right-handed alpha
Helix 150	AQ6	F	46	51	Right-handed alpha
Helix 151	AQ7	F	76	90	Right-handed alpha
Helix 152	AQ8	F	104	107	Right-handed 310
Helix 153	AQ9	F	108	126	Right-handed alpha
Helix 154	AR1	F	132	154	Right-handed alpha
Helix 155	AR2	F	156	160	Right-handed 310
Helix 156	AR3	F	163	179	Right-handed alpha
Helix 157	AR4	F	182	196	Right-handed alpha
Helix 158	AR5	F	201	205	Right-handed 310
Helix 159	AR6	F	210	214	Right-handed 310
Helix 160	AR7	F	215	233	Right-handed alpha
Helix 161	AR8	F	248	254	Right-handed alpha
Helix 162	AR9	F	267	272	Right-handed alpha
Helix 163	AS1	F	282	284	Right-handed 310
Helix 164	AS2	F	285	300	Right-handed alpha
Helix 165	AS3	F	314	321	Right-handed alpha
Helix 166	AS4	F	329	335	Right-handed alpha
Helix 167	AS5	F	336	348	Right-handed alpha
Helix 168	AS6	F	351	355	Right-handed 310
Helix 169	AS7	F	356	361	Right-handed alpha
Helix 170	AS8	F	363	370	Right-handed alpha
Helix 171	AS9	F	377	386	Right-handed alpha
Helix 172	AT1	F	417	419	Right-handed 310
Helix 173	AT2	F	420	438	Right-handed alpha
Helix 174	AT3	F	441	454	Right-handed alpha
Helix 175	AT4	F	460	468	Right-handed alpha

There are 17 sheets in PDB entry 5MUX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	67	first strand
Strand 2	A	74	75	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	98	first strand
Strand 2	A	102	103	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	372	376	first strand
Strand 2	A	308	313	parallel
Strand 3	A	394	399	anti-parallel
Strand 4	A	409	411	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	67	first strand
Strand 2	B	74	75	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	98	first strand
Strand 2	B	102	103	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	372	376	first strand
Strand 2	B	306	313	parallel
Strand 3	B	394	400	anti-parallel
Strand 4	B	409	411	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	67	first strand
Strand 2	C	74	75	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	97	98	first strand
Strand 2	C	102	103	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	372	376	first strand
Strand 2	C	306	313	parallel
Strand 3	C	394	400	anti-parallel
Strand 4	C	409	411	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	67	first strand
Strand 2	D	74	75	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	97	98	first strand
Strand 2	D	102	103	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	372	376	first strand
Strand 2	D	306	313	parallel
Strand 3	D	394	400	anti-parallel
Strand 4	D	409	411	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	66	67	first strand
Strand 2	E	74	75	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	97	98	first strand
Strand 2	E	102	103	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	372	376	first strand
Strand 2	E	306	313	parallel
Strand 3	E	394	400	anti-parallel
Strand 4	E	409	411	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	66	67	first strand
Strand 2	F	74	75	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	372	376	first strand
Strand 2	F	306	313	parallel
Strand 3	F	394	400	anti-parallel
Strand 4	F	409	411	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5MUX

Analysis of interatomic Contacts of Structural Units in PDB entry:
5MUX