Analysis of interatomic Contacts of Structural Units in PDB entry:
5MV0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MV0 entry

There are 4 chains in PDB entry 5MV0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 0SER 199
B
 PRO 0LYS 205
C
 MET 1ASP 193
D
 MET 1LEU 197
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 5MV0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 19Right-handed alpha
Helix 2
AA2
A
20 26Right-handed 310
Helix 3
AA3
A
31 56Right-handed alpha
Helix 4
AA4
A
65 74Right-handed alpha
Helix 5
AA5
A
107 121Right-handed alpha
Helix 6
AA6
A
124 132Right-handed alpha
Helix 7
AA7
A
152 169Right-handed alpha
Helix 8
AA8
A
170 176Right-handed 310
Helix 9
AA9
A
178 191Right-handed alpha
Helix 10
AB1
A
194 199Right-handed alpha
Helix 11
AB2
B
1 19Right-handed alpha
Helix 12
AB3
B
20 26Right-handed 310
Helix 13
AB4
B
31 56Right-handed alpha
Helix 14
AB5
B
65 72Right-handed alpha
Helix 15
AB6
B
107 121Right-handed alpha
Helix 16
AB7
B
124 132Right-handed alpha
Helix 17
AB8
B
152 169Right-handed alpha
Helix 18
AB9
B
170 176Right-handed 310
Helix 19
AC1
B
178 191Right-handed alpha
Helix 20
AC2
B
193 199Right-handed alpha
Helix 21
AC3
C
2 19Right-handed alpha
Helix 22
AC4
C
20 25Right-handed 310
Helix 23
AC5
C
31 56Right-handed alpha
Helix 24
AC6
C
65 74Right-handed alpha
Helix 25
AC7
C
107 121Right-handed alpha
Helix 26
AC8
C
124 132Right-handed alpha
Helix 27
AC9
C
152 169Right-handed alpha
Helix 28
AD1
C
170 176Right-handed 310
Helix 29
AD2
C
178 191Right-handed alpha
Helix 30
AD3
D
2 19Right-handed alpha
Helix 31
AD4
D
20 25Right-handed 310
Helix 32
AD5
D
31 56Right-handed alpha
Helix 33
AD6
D
65 72Right-handed alpha
Helix 34
AD7
D
107 121Right-handed alpha
Helix 35
AD8
D
124 132Right-handed alpha
Helix 36
AD9
D
152 169Right-handed alpha
Helix 37
AE1
D
170 176Right-handed 310
Helix 38
AE2
D
178 191Right-handed alpha
Helix 39
AE3
D
193 197Right-handed 310
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There are 4 sheets in PDB entry 5MV0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
87 91anti-parallel
Strand 3
A
96 104anti-parallel
Strand 4
A
135 143parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 59first strand
Strand 2
B
87 91anti-parallel
Strand 3
B
96 104anti-parallel
Strand 4
B
135 143parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 59first strand
Strand 2
C
87 91anti-parallel
Strand 3
C
96 104anti-parallel
Strand 4
C
135 143parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
58 59first strand
Strand 2
D
87 91anti-parallel
Strand 3
D
96 104anti-parallel
Strand 4
D
135 143parallel
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