Analysis of interatomic Contacts of Structural Units in PDB entry:
5MW1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5MW1 entry

There are 6 chains in PDB entry 5MW1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	SER 5	PRO 430
A	SER 5	PRO 430
C	SER 5	PRO 430
D	SER 5	PRO 430
E	SER 5	PRO 430
F	SER 5	PRO 430

There are126 helices in PDB entry 5MW1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	6	12	Right-handed alpha
Helix 2	AA2	B	47	52	Right-handed alpha
Helix 3	AA3	B	55	62	Right-handed alpha
Helix 4	AA4	B	66	74	Right-handed alpha
Helix 5	AA5	B	76	83	Right-handed alpha
Helix 6	AA6	B	97	114	Right-handed alpha
Helix 7	AA7	B	136	154	Right-handed alpha
Helix 8	AA8	B	164	173	Right-handed alpha
Helix 9	AA9	B	208	222	Right-handed alpha
Helix 10	AB1	B	224	229	Right-handed alpha
Helix 11	AB2	B	230	242	Right-handed alpha
Helix 12	AB3	B	247	258	Right-handed alpha
Helix 13	AB4	B	258	263	Right-handed alpha
Helix 14	AB5	B	278	281	Right-handed 310
Helix 15	AB6	B	282	290	Right-handed alpha
Helix 16	AB7	B	298	308	Right-handed alpha
Helix 17	AB8	B	325	335	Right-handed alpha
Helix 18	AB9	B	338	346	Right-handed alpha
Helix 19	AC1	B	370	383	Right-handed alpha
Helix 20	AC2	B	383	390	Right-handed alpha
Helix 21	AC3	B	400	412	Right-handed alpha
Helix 22	AC4	A	6	12	Right-handed alpha
Helix 23	AC5	A	47	52	Right-handed alpha
Helix 24	AC6	A	55	62	Right-handed alpha
Helix 25	AC7	A	66	74	Right-handed alpha
Helix 26	AC8	A	76	83	Right-handed alpha
Helix 27	AC9	A	97	114	Right-handed alpha
Helix 28	AD1	A	136	154	Right-handed alpha
Helix 29	AD2	A	164	173	Right-handed alpha
Helix 30	AD3	A	208	222	Right-handed alpha
Helix 31	AD4	A	224	229	Right-handed alpha
Helix 32	AD5	A	230	242	Right-handed alpha
Helix 33	AD6	A	247	258	Right-handed alpha
Helix 34	AD7	A	258	263	Right-handed alpha
Helix 35	AD8	A	278	281	Right-handed 310
Helix 36	AD9	A	282	290	Right-handed alpha
Helix 37	AE1	A	298	308	Right-handed alpha
Helix 38	AE2	A	325	335	Right-handed alpha
Helix 39	AE3	A	338	346	Right-handed alpha
Helix 40	AE4	A	370	383	Right-handed alpha
Helix 41	AE5	A	383	390	Right-handed alpha
Helix 42	AE6	A	400	412	Right-handed alpha
Helix 43	AE7	C	6	12	Right-handed alpha
Helix 44	AE8	C	47	52	Right-handed alpha
Helix 45	AE9	C	55	62	Right-handed alpha
Helix 46	AF1	C	66	72	Right-handed alpha
Helix 47	AF2	C	76	83	Right-handed alpha
Helix 48	AF3	C	97	114	Right-handed alpha
Helix 49	AF4	C	136	154	Right-handed alpha
Helix 50	AF5	C	164	173	Right-handed alpha
Helix 51	AF6	C	208	222	Right-handed alpha
Helix 52	AF7	C	224	229	Right-handed alpha
Helix 53	AF8	C	230	242	Right-handed alpha
Helix 54	AF9	C	247	258	Right-handed alpha
Helix 55	AG1	C	258	263	Right-handed alpha
Helix 56	AG2	C	278	281	Right-handed 310
Helix 57	AG3	C	282	290	Right-handed alpha
Helix 58	AG4	C	298	308	Right-handed alpha
Helix 59	AG5	C	325	335	Right-handed alpha
Helix 60	AG6	C	338	346	Right-handed alpha
Helix 61	AG7	C	370	383	Right-handed alpha
Helix 62	AG8	C	383	390	Right-handed alpha
Helix 63	AG9	C	400	412	Right-handed alpha
Helix 64	AH1	D	6	12	Right-handed alpha
Helix 65	AH2	D	47	52	Right-handed alpha
Helix 66	AH3	D	55	62	Right-handed alpha
Helix 67	AH4	D	66	74	Right-handed alpha
Helix 68	AH5	D	76	83	Right-handed alpha
Helix 69	AH6	D	97	114	Right-handed alpha
Helix 70	AH7	D	136	154	Right-handed alpha
Helix 71	AH8	D	164	173	Right-handed alpha
Helix 72	AH9	D	208	222	Right-handed alpha
Helix 73	AI1	D	224	229	Right-handed alpha
Helix 74	AI2	D	230	242	Right-handed alpha
Helix 75	AI3	D	247	258	Right-handed alpha
Helix 76	AI4	D	258	263	Right-handed alpha
Helix 77	AI5	D	278	281	Right-handed 310
Helix 78	AI6	D	282	290	Right-handed alpha
Helix 79	AI7	D	298	308	Right-handed alpha
Helix 80	AI8	D	325	335	Right-handed alpha
Helix 81	AI9	D	338	346	Right-handed alpha
Helix 82	AJ1	D	370	383	Right-handed alpha
Helix 83	AJ2	D	383	390	Right-handed alpha
Helix 84	AJ3	D	400	412	Right-handed alpha
Helix 85	AJ4	E	6	12	Right-handed alpha
Helix 86	AJ5	E	47	52	Right-handed alpha
Helix 87	AJ6	E	55	62	Right-handed alpha
Helix 88	AJ7	E	66	72	Right-handed alpha
Helix 89	AJ8	E	76	83	Right-handed alpha
Helix 90	AJ9	E	97	114	Right-handed alpha
Helix 91	AK1	E	136	154	Right-handed alpha
Helix 92	AK2	E	164	173	Right-handed alpha
Helix 93	AK3	E	208	222	Right-handed alpha
Helix 94	AK4	E	224	229	Right-handed alpha
Helix 95	AK5	E	230	242	Right-handed alpha
Helix 96	AK6	E	247	258	Right-handed alpha
Helix 97	AK7	E	258	263	Right-handed alpha
Helix 98	AK8	E	278	281	Right-handed 310
Helix 99	AK9	E	282	290	Right-handed alpha
Helix 100	AL1	E	298	308	Right-handed alpha
Helix 101	AL2	E	325	335	Right-handed alpha
Helix 102	AL3	E	338	346	Right-handed alpha
Helix 103	AL4	E	370	383	Right-handed alpha
Helix 104	AL5	E	383	390	Right-handed alpha
Helix 105	AL6	E	400	412	Right-handed alpha
Helix 106	AL7	F	6	12	Right-handed alpha
Helix 107	AL8	F	47	52	Right-handed alpha
Helix 108	AL9	F	55	62	Right-handed alpha
Helix 109	AM1	F	66	74	Right-handed alpha
Helix 110	AM2	F	76	83	Right-handed alpha
Helix 111	AM3	F	97	114	Right-handed alpha
Helix 112	AM4	F	136	154	Right-handed alpha
Helix 113	AM5	F	164	173	Right-handed alpha
Helix 114	AM6	F	208	222	Right-handed alpha
Helix 115	AM7	F	224	229	Right-handed alpha
Helix 116	AM8	F	230	242	Right-handed alpha
Helix 117	AM9	F	247	258	Right-handed alpha
Helix 118	AN1	F	258	263	Right-handed alpha
Helix 119	AN2	F	278	281	Right-handed 310
Helix 120	AN3	F	282	290	Right-handed alpha
Helix 121	AN4	F	298	309	Right-handed alpha
Helix 122	AN5	F	325	335	Right-handed alpha
Helix 123	AN6	F	338	346	Right-handed alpha
Helix 124	AN7	F	370	383	Right-handed alpha
Helix 125	AN8	F	383	390	Right-handed alpha
Helix 126	AN9	F	400	412	Right-handed alpha

There are 24 sheets in PDB entry 5MW1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	37	first strand
Strand 2	B	22	27	anti-parallel
Strand 3	B	13	17	anti-parallel
Strand 4	B	125	131	parallel
Strand 5	B	156	163	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	65	first strand
Strand 2	B	40	42	anti-parallel
Strand 3	B	84	85	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	391	394	first strand
Strand 2	B	348	352	parallel
Strand 3	B	177	181	parallel
Strand 4	B	188	192	anti-parallel
Strand 5	B	202	204	anti-parallel
Strand 6	D	309	310	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	267	first strand
Strand 2	B	273	275	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	309	310	first strand
Strand 2	A	202	204	parallel
Strand 3	A	188	192	anti-parallel
Strand 4	A	177	181	anti-parallel
Strand 5	A	348	352	parallel
Strand 6	A	391	394	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	37	first strand
Strand 2	A	22	27	anti-parallel
Strand 3	A	13	17	anti-parallel
Strand 4	A	125	131	parallel
Strand 5	A	156	163	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	65	first strand
Strand 2	A	40	42	anti-parallel
Strand 3	A	84	85	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	267	first strand
Strand 2	A	273	275	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	309	310	first strand
Strand 2	F	202	204	parallel
Strand 3	F	188	192	anti-parallel
Strand 4	F	177	181	anti-parallel
Strand 5	F	348	352	parallel
Strand 6	F	391	394	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	34	37	first strand
Strand 2	C	22	27	anti-parallel
Strand 3	C	13	17	anti-parallel
Strand 4	C	125	131	parallel
Strand 5	C	156	163	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	63	65	first strand
Strand 2	C	40	42	anti-parallel
Strand 3	C	84	85	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	391	394	first strand
Strand 2	C	348	352	parallel
Strand 3	C	177	181	parallel
Strand 4	C	188	192	anti-parallel
Strand 5	C	202	204	anti-parallel
Strand 6	E	309	310	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	265	267	first strand
Strand 2	C	273	275	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	309	310	first strand
Strand 2	D	202	204	parallel
Strand 3	D	188	192	anti-parallel
Strand 4	D	177	181	anti-parallel
Strand 5	D	348	352	parallel
Strand 6	D	391	394	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	34	37	first strand
Strand 2	D	22	27	anti-parallel
Strand 3	D	13	17	anti-parallel
Strand 4	D	125	131	parallel
Strand 5	D	156	163	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	63	65	first strand
Strand 2	D	40	42	anti-parallel
Strand 3	D	84	85	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	265	267	first strand
Strand 2	D	273	275	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	34	37	first strand
Strand 2	E	22	27	anti-parallel
Strand 3	E	13	17	anti-parallel
Strand 4	E	125	131	parallel
Strand 5	E	156	163	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	63	65	first strand
Strand 2	E	40	42	anti-parallel
Strand 3	E	84	85	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	202	203	first strand
Strand 2	E	188	192	anti-parallel
Strand 3	E	177	181	anti-parallel
Strand 4	E	348	352	parallel
Strand 5	E	391	394	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	265	267	first strand
Strand 2	E	273	275	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	34	37	first strand
Strand 2	F	22	27	anti-parallel
Strand 3	F	13	17	anti-parallel
Strand 4	F	125	131	parallel
Strand 5	F	156	163	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	63	65	first strand
Strand 2	F	40	42	anti-parallel
Strand 3	F	84	85	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	265	267	first strand
Strand 2	F	273	275	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5MW1

Analysis of interatomic Contacts of Structural Units in PDB entry:
5MW1