Analysis of interatomic Contacts of Structural Units in PDB entry:
5MWJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5MWJ entry

There are 2 chains in PDB entry 5MWJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 435	TYR 770
B	TYR 435	TYR 770

There are no helices in PDB entry 5MWJ

There are 15 sheets in PDB entry 5MWJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	436	444	first strand
Strand 2	B	436	444	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	457	458	first strand
Strand 2	A	447	450	anti-parallel
Strand 3	A	691	694	anti-parallel
Strand 4	A	681	685	anti-parallel
Strand 5	A	671	676	anti-parallel
Strand 6	A	660	665	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	474	481	first strand
Strand 2	A	763	769	anti-parallel
Strand 3	A	753	758	anti-parallel
Strand 4	A	742	747	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	489	492	first strand
Strand 2	A	498	502	anti-parallel
Strand 3	A	506	511	anti-parallel
Strand 4	A	522	525	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	533	538	first strand
Strand 2	A	544	549	anti-parallel
Strand 3	A	553	558	anti-parallel
Strand 4	A	565	571	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	577	582	first strand
Strand 2	A	588	593	anti-parallel
Strand 3	A	598	602	anti-parallel
Strand 4	A	607	612	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	619	624	first strand
Strand 2	A	630	635	anti-parallel
Strand 3	A	639	644	anti-parallel
Strand 4	A	649	655	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	701	706	first strand
Strand 2	A	712	717	anti-parallel
Strand 3	A	721	726	anti-parallel
Strand 4	A	732	737	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	457	458	first strand
Strand 2	B	447	450	anti-parallel
Strand 3	B	691	694	anti-parallel
Strand 4	B	681	685	anti-parallel
Strand 5	B	671	676	anti-parallel
Strand 6	B	660	665	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	474	481	first strand
Strand 2	B	763	769	anti-parallel
Strand 3	B	753	758	anti-parallel
Strand 4	B	742	747	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	489	492	first strand
Strand 2	B	498	502	anti-parallel
Strand 3	B	507	511	anti-parallel
Strand 4	B	522	524	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	533	538	first strand
Strand 2	B	544	549	anti-parallel
Strand 3	B	553	558	anti-parallel
Strand 4	B	565	571	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	577	582	first strand
Strand 2	B	588	593	anti-parallel
Strand 3	B	598	602	anti-parallel
Strand 4	B	607	612	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	619	624	first strand
Strand 2	B	630	635	anti-parallel
Strand 3	B	639	644	anti-parallel
Strand 4	B	649	655	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	701	706	first strand
Strand 2	B	712	717	anti-parallel
Strand 3	B	721	726	anti-parallel
Strand 4	B	732	737	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5MWJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
5MWJ