Analysis of interatomic Contacts of Structural Units in PDB entry:
5MWK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MWK entry

There is 1 chain in PDB entry 5MWK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 30ASN 1102
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 5MWK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 37Right-handed alpha
Helix 2
AA2
A
39 43Right-handed 310
Helix 3
AA3
A
56 71Right-handed alpha
Helix 4
AA4
A
86 90Right-handed 310
Helix 5
AA5
A
97 115Right-handed alpha
Helix 6
AA6
A
135 139Right-handed 310
Helix 7
AA7
A
165 169Right-handed 310
Helix 8
AA8
A
204 208Right-handed 310
Helix 9
AA9
A
247 251Right-handed 310
Helix 10
AB1
A
311 316Right-handed 310
Helix 11
AB2
A
335 340Right-handed alpha
Helix 12
AB3
A
356 360Right-handed 310
Helix 13
AB4
A
362 366Right-handed 310
Helix 14
AB5
A
424 435Right-handed alpha
Helix 15
AB6
A
436 441Right-handed 310
Helix 16
AB7
A
444 451Right-handed alpha
Helix 17
AB8
A
470 480Right-handed alpha
Helix 18
AB9
A
483 492Right-handed 310
Helix 19
AC1
A
497 519Right-handed alpha
Helix 20
AC2
A
519 531Right-handed alpha
Helix 21
AC3
A
549 555Right-handed 310
Helix 22
AC4
A
571 585Right-handed alpha
Helix 23
AC5
A
605 608Right-handed 310
Helix 24
AC6
A
609 620Right-handed alpha
Helix 25
AC7
A
656 676Right-handed alpha
Helix 26
AC8
A
698 703Right-handed 310
Helix 27
AC9
A
706 711Right-handed alpha
Helix 28
AD1
A
711 724Right-handed alpha
Helix 29
AD2
A
744 748Right-handed 310
Helix 30
AD3
A
761 768Right-handed alpha
Helix 31
AD4
A
803 816Right-handed alpha
Helix 32
AD5
A
830 834Right-handed 310
Helix 33
AD6
A
960 962Right-handed 310
Helix 34
AD7
A
972 976Right-handed 310
Helix 35
AD8
A
978 983Right-handed alpha
Helix 36
AD9
A
1039 1042Right-handed 310
Helix 37
AE1
A
1057 1066Right-handed alpha
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There are 16 sheets in PDB entry 5MWK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 51first strand
Strand 2
A
74 80parallel
Strand 3
A
117 121parallel
Strand 4
A
452 457parallel
Strand 5
A
534 537parallel
Strand 6
A
557 563parallel
Strand 7
A
591 596parallel
Strand 8
A
623 630parallel
Strand 9
A
45 51parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 146first strand
Strand 2
A
386 404anti-parallel
Strand 3
A
149 158anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 146first strand
Strand 2
A
386 404anti-parallel
Strand 3
A
171 179anti-parallel
Strand 4
A
367 368anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 196first strand
Strand 2
A
223 241anti-parallel
Strand 3
A
283 299anti-parallel
Strand 4
A
253 257anti-parallel
Strand 5
A
264 268anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 196first strand
Strand 2
A
223 241anti-parallel
Strand 3
A
324 328anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 211first strand
Strand 2
A
217 219anti-parallel
Strand 3
A
320 322anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 274first strand
Strand 2
A
345 346anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
638 640first strand
Strand 2
A
1074 1076parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
679 680first strand
Strand 2
A
845 852anti-parallel
Strand 3
A
855 862anti-parallel
Strand 4
A
915 921anti-parallel
Strand 5
A
882 884anti-parallel
Strand 6
A
891 892anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
757 760first strand
Strand 2
A
684 687parallel
Strand 3
A
786 788parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
729 731first strand
Strand 2
A
737 739anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
770 772first strand
Strand 2
A
775 777anti-parallel
Strand 3
A
783 784anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
839 840first strand
Strand 2
A
868 874anti-parallel
Strand 3
A
903 910anti-parallel
Strand 4
A
898 900anti-parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
964 967first strand
Strand 2
A
954 958anti-parallel
Strand 3
A
987 996anti-parallel
Strand 4
A
1045 1054anti-parallel
Strand 5
A
1016 1021anti-parallel
Strand 6
A
1024 1029anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1035 1037first strand
Strand 2
A
1005 1009anti-parallel
Strand 3
A
1097 1101anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1012 1014first strand
Strand 2
A
1091 1094anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il