Analysis of interatomic Contacts of Structural Units in PDB entry:
5MWL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MWL entry

There are 2 chains in PDB entry 5MWL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 5VAL 464
B
 GLU 8THR 463
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 5MWL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 68Right-handed alpha
Helix 2
AA2
A
81 94Right-handed alpha
Helix 3
AA3
A
153 157Right-handed 310
Helix 4
AA4
A
159 171Right-handed alpha
Helix 5
AA5
A
181 187Right-handed alpha
Helix 6
AA6
A
189 203Right-handed alpha
Helix 7
AA7
A
229 242Right-handed alpha
Helix 8
AA8
A
253 271Right-handed alpha
Helix 9
AA9
A
317 327Right-handed alpha
Helix 10
AB1
A
336 350Right-handed alpha
Helix 11
AB2
A
352 357Right-handed alpha
Helix 12
AB3
A
364 371Right-handed alpha
Helix 13
AB4
A
382 400Right-handed alpha
Helix 14
AB5
A
442 444Right-handed 310
Helix 15
AB6
A
445 464Right-handed alpha
Helix 16
AB7
B
45 62Right-handed alpha
Helix 17
AB8
B
62 67Right-handed alpha
Helix 18
AB9
B
81 94Right-handed alpha
Helix 19
AC1
B
152 157Right-handed 310
Helix 20
AC2
B
159 171Right-handed alpha
Helix 21
AC3
B
181 186Right-handed alpha
Helix 22
AC4
B
189 203Right-handed alpha
Helix 23
AC5
B
229 242Right-handed alpha
Helix 24
AC6
B
253 271Right-handed alpha
Helix 25
AC7
B
317 327Right-handed alpha
Helix 26
AC8
B
332 350Right-handed alpha
Helix 27
AC9
B
352 358Right-handed alpha
Helix 28
AD1
B
364 372Right-handed alpha
Helix 29
AD2
B
381 398Right-handed alpha
Helix 30
AD3
B
444 463Right-handed alpha
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There are 5 sheets in PDB entry 5MWL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 17first strand
Strand 2
A
20 25anti-parallel
Strand 3
A
30 37anti-parallel
Strand 4
A
111 116anti-parallel
Strand 5
A
77 79anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 17first strand
Strand 2
A
20 25anti-parallel
Strand 3
A
30 37anti-parallel
Strand 4
A
104 105anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 216first strand
Strand 2
A
208 212anti-parallel
Strand 3
A
133 137anti-parallel
Strand 4
A
402 407anti-parallel
Strand 5
A
433 436anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 16first strand
Strand 2
B
21 25anti-parallel
Strand 3
B
30 34anti-parallel
Strand 4
B
111 116anti-parallel
Strand 5
B
77 79anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
215 218first strand
Strand 2
B
208 212anti-parallel
Strand 3
B
133 137anti-parallel
Strand 4
B
402 409anti-parallel
Strand 5
B
429 436anti-parallel
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