Analysis of interatomic Contacts of Structural Units in PDB entry:
5MWN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5MWN entry

There are 7 chains in PDB entry 5MWN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ALA 312
B	MET 1	PRO 315
C	MET 1	SER 313
D	GLN 1	SER 119
E	GLN 1	SER 119
F	GLN 1	HIS 120
N	GLN 1	GLN 1

There are 32 helices in PDB entry 5MWN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	38	Right-handed alpha
Helix 2	AA2	A	53	56	Right-handed 310
Helix 3	AA3	A	89	92	Right-handed 310
Helix 4	AA4	A	190	193	Right-handed 310
Helix 5	AA5	A	194	218	Right-handed alpha
Helix 6	AA6	A	231	256	Right-handed alpha
Helix 7	AA7	A	260	276	Right-handed alpha
Helix 8	AA8	A	283	287	Right-handed 310
Helix 9	AA9	A	294	297	Right-handed 310
Helix 10	AB1	A	298	312	Right-handed alpha
Helix 11	AB2	B	15	38	Right-handed alpha
Helix 12	AB3	B	53	56	Right-handed 310
Helix 13	AB4	B	89	92	Right-handed 310
Helix 14	AB5	B	190	193	Right-handed 310
Helix 15	AB6	B	194	217	Right-handed alpha
Helix 16	AB7	B	230	232	Right-handed 310
Helix 17	AB8	B	233	256	Right-handed alpha
Helix 18	AB9	B	260	277	Right-handed alpha
Helix 19	AC1	B	294	297	Right-handed 310
Helix 20	AC2	B	298	312	Right-handed alpha
Helix 21	AC3	C	15	38	Right-handed alpha
Helix 22	AC4	C	53	56	Right-handed 310
Helix 23	AC5	C	89	92	Right-handed 310
Helix 24	AC6	C	190	193	Right-handed 310
Helix 25	AC7	C	194	222	Right-handed alpha
Helix 26	AC8	C	230	256	Right-handed alpha
Helix 27	AC9	C	260	277	Right-handed alpha
Helix 28	AD1	C	294	297	Right-handed 310
Helix 29	AD2	C	298	313	Right-handed alpha
Helix 30	AD3	D	86	90	Right-handed 310
Helix 31	AD4	E	86	90	Right-handed 310
Helix 32	AD5	F	86	90	Right-handed 310

There are 25 sheets in PDB entry 5MWN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	50	first strand
Strand 2	A	58	67	anti-parallel
Strand 3	A	73	75	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	50	first strand
Strand 2	A	58	67	anti-parallel
Strand 3	A	86	87	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	154	first strand
Strand 2	A	96	104	anti-parallel
Strand 3	A	162	172	anti-parallel
Strand 4	A	178	180	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	106	107	first strand
Strand 2	E	104	109	parallel
Strand 3	E	91	101	anti-parallel
Strand 4	E	113	118	anti-parallel
Strand 5	E	10	13	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	106	107	first strand
Strand 2	E	104	109	parallel
Strand 3	E	91	101	anti-parallel
Strand 4	E	31	39	anti-parallel
Strand 5	E	46	52	anti-parallel
Strand 6	E	57	59	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	133	first strand
Strand 2	A	140	148	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	221	222	first strand
Strand 2	A	225	226	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	50	first strand
Strand 2	B	58	67	anti-parallel
Strand 3	B	73	75	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	50	first strand
Strand 2	B	58	67	anti-parallel
Strand 3	B	86	87	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	151	154	first strand
Strand 2	B	96	104	anti-parallel
Strand 3	B	162	172	anti-parallel
Strand 4	B	178	180	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	106	107	first strand
Strand 2	D	104	109	parallel
Strand 3	D	91	101	anti-parallel
Strand 4	D	113	118	anti-parallel
Strand 5	D	10	13	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	106	107	first strand
Strand 2	D	104	109	parallel
Strand 3	D	91	101	anti-parallel
Strand 4	D	31	39	anti-parallel
Strand 5	D	46	52	anti-parallel
Strand 6	D	57	59	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	133	first strand
Strand 2	B	140	148	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	50	first strand
Strand 2	C	58	67	anti-parallel
Strand 3	C	73	75	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	50	first strand
Strand 2	C	58	67	anti-parallel
Strand 3	C	86	87	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	151	154	first strand
Strand 2	C	96	104	anti-parallel
Strand 3	C	162	172	anti-parallel
Strand 4	C	178	180	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	106	107	first strand
Strand 2	F	104	109	parallel
Strand 3	F	91	101	anti-parallel
Strand 4	F	113	118	anti-parallel
Strand 5	F	10	13	parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	106	107	first strand
Strand 2	F	104	109	parallel
Strand 3	F	91	101	anti-parallel
Strand 4	F	31	39	anti-parallel
Strand 5	F	46	52	anti-parallel
Strand 6	F	57	59	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	133	first strand
Strand 2	C	140	148	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	7	first strand
Strand 2	D	18	26	anti-parallel
Strand 3	D	77	82	anti-parallel
Strand 4	D	67	72	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2	7	first strand
Strand 2	E	18	26	anti-parallel
Strand 3	E	77	82	anti-parallel
Strand 4	E	67	72	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2	7	first strand
Strand 2	F	18	26	anti-parallel
Strand 3	F	77	82	anti-parallel
Strand 4	F	67	72	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	3	7	first strand
Strand 2	N	17	25	anti-parallel
Strand 3	N	77	83	anti-parallel
Strand 4	N	67	72	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	55	59	first strand
Strand 2	N	45	52	anti-parallel
Strand 3	N	32	39	anti-parallel
Strand 4	N	92	101	anti-parallel
Strand 5	N	104	109	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	55	59	first strand
Strand 2	N	45	52	anti-parallel
Strand 3	N	32	39	anti-parallel
Strand 4	N	92	101	anti-parallel
Strand 5	N	113	114	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5MWN

Analysis of interatomic Contacts of Structural Units in PDB entry:
5MWN