Analysis of interatomic Contacts of Structural Units in PDB entry:
5MZ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MZ6 entry

There are 2 chains in PDB entry 5MZ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
1
 HIS 12GLN 1140
B
 LEU 118GLU 191
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 5MZ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
1
12 41Right-handed alpha
Helix 2
AA2
1
41 49Right-handed alpha
Helix 3
AA3
1
56 58Right-handed 310
Helix 4
AA4
1
59 72Right-handed alpha
Helix 5
AA5
1
78 96Right-handed alpha
Helix 6
AA6
1
96 102Right-handed alpha
Helix 7
AA7
1
103 104Right-handed 310
Helix 8
AA8
1
105 109Right-handed 310
Helix 9
AA9
1
114 125Right-handed alpha
Helix 10
AB1
1
127 143Right-handed alpha
Helix 11
AB2
1
144 149Right-handed alpha
Helix 12
AB3
1
150 158Right-handed alpha
Helix 13
AB4
1
160 171Right-handed alpha
Helix 14
AB5
1
177 193Right-handed alpha
Helix 15
AB6
1
198 214Right-handed alpha
Helix 16
AB7
1
218 232Right-handed alpha
Helix 17
AB8
1
233 237Right-handed 310
Helix 18
AB9
1
251 257Right-handed alpha
Helix 19
AC1
1
258 271Right-handed alpha
Helix 20
AC2
1
272 275Right-handed 310
Helix 21
AC3
1
304 321Right-handed alpha
Helix 22
AC4
1
329 346Right-handed alpha
Helix 23
AC5
1
347 365Right-handed alpha
Helix 24
AC6
1
370 386Right-handed alpha
Helix 25
AC7
1
451 456Right-handed alpha
Helix 26
AC8
1
459 475Right-handed alpha
Helix 27
AC9
1
477 495Right-handed alpha
Helix 28
AD1
1
495 504Right-handed alpha
Helix 29
AD2
1
513 535Right-handed alpha
Helix 30
AD3
1
539 554Right-handed alpha
Helix 31
AD4
1
560 576Right-handed alpha
Helix 32
AD5
1
629 645Right-handed alpha
Helix 33
AD6
1
651 666Right-handed alpha
Helix 34
AD7
1
669 679Right-handed alpha
Helix 35
AD8
1
681 693Right-handed alpha
Helix 36
AD9
1
703 715Right-handed alpha
Helix 37
AE1
1
751 774Right-handed alpha
Helix 38
AE2
1
779 805Right-handed alpha
Helix 39
AE3
1
806 814Right-handed 310
Helix 40
AE4
1
823 834Right-handed alpha
Helix 41
AE5
1
839 847Right-handed alpha
Helix 42
AE6
1
854 867Right-handed alpha
Helix 43
AE7
1
872 878Right-handed alpha
Helix 44
AE8
1
879 891Right-handed alpha
Helix 45
AE9
1
933 947Right-handed alpha
Helix 46
AF1
1
956 959Right-handed 310
Helix 47
AF2
1
965 969Right-handed 310
Helix 48
AF3
1
971 984Right-handed alpha
Helix 49
AF4
1
995 1006Right-handed alpha
Helix 50
AF5
1
1022 1027Right-handed alpha
Helix 51
AF6
1
1057 1064Right-handed alpha
Helix 52
AF7
1
1079 1094Right-handed alpha
Helix 53
AF8
1
1107 1119Right-handed alpha
Helix 54
AF9
1
1125 1129Right-handed 310
Helix 55
AG1
B
169 176Right-handed alpha
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There are 3 sheets in PDB entry 5MZ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
744 750first strand
Strand 2
1
731 737anti-parallel
Strand 3
1
719 726anti-parallel
Strand 4
1
902 906parallel
Strand 5
1
930 931parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
953 955first strand
Strand 2
1
1136 1138parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
987 990first strand
Strand 2
1
961 964parallel
Strand 3
1
1008 1011parallel
Strand 4
1
1034 1037parallel
Strand 5
1
1068 1070parallel
Strand 6
1
1131 1133anti-parallel
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